| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
|
|---|---|
Gene ID | 1002 |
Name | CDH4 |
Synonym | CAD4|R-CAD|RCAD;cadherin 4, type 1, R-cadherin (retinal);CDH4;cadherin 4, type 1, R-cadherin (retinal) |
Definition | R-cadherin|cadherin 4, type 1, preproprotein|cadherin-4|retinal cadherin |
Position | 20q13.3 |
Gene Type | protein-coding |
|
TSG scores |
Description |
| TUSON ranking | 4672 |
TUSON P-value | 1 |
|
Pathways and Diseases |
|
Pathway | Cell junction organization;Reactome;REACT:20676 |
Pathway | Cell adhesion molecules (CAMs);KEGG PATHWAY;hsa04514 |
Pathway | Myogenesis;Reactome;REACT:21303 |
Pathway | Wnt signaling pathway;PANTHER;P00057 |
Pathway | Cadherin signaling pathway;PANTHER;P00012 |
Disease | Volumetric brain MRI;GAD |
Disease | Volumetric brain MRI;NHGRI |
Disease | NEUROLOGICAL;GAD |
|
External Links |
|
Links to Entrez Gene | 1002 |
Links to all GeneRIF Items | 1002 |
Links to iHOP | 1002 |
|
Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>1002 : length: 2751 atgaccgcgggcgccggcgtgctccttctgctgctctcgctctccggcgcgctccgggcc cataatgaggatcttacaactagagagacctgcaaggctgggttctctgaagatgattac acggcattaatctcccaaaatattctagaaggggaaaagctacttcaagtcaagttcagc agctgtgtggggaccaaggggacacaatatgagaccaacagcatggacttcaaagttggg gcagatgggacagtcttcgccacccgggagctgcaggtcccctccgagcaggtggcgttc acggtgactgcatgggacagccagacagcagagaaatgggacgccgtggtgcggttgctg gtggcccagacctcgtccccgcactctggacacaagccgcagaaaggaaagaaggtcgtg gctctggacccctctccgcctccgaaggacaccctgctgccgtggccccagcaccagaac gccaacgggctgaggcggcgcaaacgggactgggtcatcccgcccatcaacgtgcccgag aactcgcgcgggcccttcccgcagcagctcgtgaggatccggtccgacaaagacaatgac atccccatccggtacagcatcacgggagtgggcgccgaccagccccccatggaggtcttc agcattgactccatgtccggccggatgtacgtcacaaggcccatggaccgggaggagcac gcctcttaccacctccgagcccacgctgtggacatgaatggcaacaaggtggagaacccc atcgacctgtacatctacgtcatcgacatgaatgacaaccgccctgagttcatcaaccag gtctacaacggctccgtggacgagggctccaagccaggcacctacgtgatgaccgtcacg gccaacgatgctgacgacagcaccacggccaacgggatggtgcggtaccggatcgtgacc cagaccccacagagcccgtcccagaatatgttcaccatcaacagcgagactggagatatc gtcacagtggcggctggcctggaccgagagaaagttcagcagtacacagtcatcgttcag gccacagatatggaaggaaatctcaactatggcctctcaaacacagccacagccatcatc acggtgacagatgtgaatgacaacccgccagaatttaccgccagcacgtttgcaggggag gtccccgaaaaccgcgtggagaccgtggtcgcaaacctcacggtgatggaccgagatcag ccccactctccaaactggaatgccgtttaccgcatcatcagtggggatccatccgggcac ttcagcgtccgcacagaccccgtaaccaacgagggcatggtcaccgtggtgaaggcagtc gactacgagctcaacagagctttcatgctgacagtgatggtgtccaaccaggcgcccctg gccagcggaatccagatgtccttccagtccacggcaggggtgaccatctccatcatggac atcaacgaggctccctacttcccctcaaaccacaagctgatccgcctggaggagggcgtg ccccccggcaccgtgctgaccacgttttcagctgtggaccctgaccggttcatgcagcag gctgtgagatactcaaagctgtcagacccagcgagctggctgcacatcaatgccaccaac ggccagatcaccacggcggcagtgctggaccgtgagtccctctacaccaaaaacaacgtc tacgaggccaccttcctggcagctgacaatgggatacccccggccagcggcaccgggacc ctccagatctatctcattgacatcaacgacaacgcccctgagctgctgcccaaggaggcg cagatctgcgagaagcccaacctgaacgccatcaacatcacggcggccgacgctgacgtc gaccccaacatcggcccctacgtcttcgagctgccctttgtcccggcggccgtgcggaag aactggaccatcacccgcctgaacggtgactatgcccaactcagcttgcgcatcctgtac ctggaggccgggatgtatgacgtccccatcatcgtcacagactctggaaaccctcccctg tccaacacgtccatcatcaaagtcaaggtgtgcccatgtgatgacaacggggactgcacc accattggcgcagtggcagcggctggtctgggcaccggtgccatcgtggccatcctcatc tgcatcctcatcctgctgaccatggtcctgctgtttgtcatgtggatgaagcggcgagag aaggagcgccacacgaagcagctgctcattgaccccgaggacgacgtccgcgacaacatc ctcaagtatgacgaggaaggcggtggcgaggaggaccaggactacgacctcagccagctg cagcagccggaagccatggggcacgtgccaagcaaagcccctggcgtgcgtcgcgtggat gagcggccggtgggcgctgagccccagtacccgatcaggcccatggtgccgcacccaggc gacatcggtgacttcatcaatgagggactccgcgctgctgacaacgaccccacggcaccc ccctatgactccctgctggtcttcgactacgaggggagcggctccaccgcaggctccgtc agctccctgaactcatccagttccggggaccaagactacgattacctcaacgactggggg cccagattcaagaagctggcggacatgtatggaggtggtgaagaggattga |
Protein Sequence |
>1002 : length: 916 MTAGAGVLLLLLSLSGALRAHNEDLTTRETCKAGFSEDDYTALISQNILEGEKLLQVKFS SCVGTKGTQYETNSMDFKVGADGTVFATRELQVPSEQVAFTVTAWDSQTAEKWDAVVRLL VAQTSSPHSGHKPQKGKKVVALDPSPPPKDTLLPWPQHQNANGLRRRKRDWVIPPINVPE NSRGPFPQQLVRIRSDKDNDIPIRYSITGVGADQPPMEVFSIDSMSGRMYVTRPMDREEH ASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVT ANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQ ATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTASTFAGEVPENRVETVVANLTVMDRDQ PHSPNWNAVYRIISGDPSGHFSVRTDPVTNEGMVTVVKAVDYELNRAFMLTVMVSNQAPL ASGIQMSFQSTAGVTISIMDINEAPYFPSNHKLIRLEEGVPPGTVLTTFSAVDPDRFMQQ AVRYSKLSDPASWLHINATNGQITTAAVLDRESLYTKNNVYEATFLAADNGIPPASGTGT LQIYLIDINDNAPELLPKEAQICEKPNLNAINITAADADVDPNIGPYVFELPFVPAAVRK NWTITRLNGDYAQLSLRILYLEAGMYDVPIIVTDSGNPPLSNTSIIKVKVCPCDDNGDCT TIGAVAAAGLGTGAIVAILICILILLTMVLLFVMWMKRREKERHTKQLLIDPEDDVRDNI LKYDEEGGGEEDQDYDLSQLQQPEAMGHVPSKAPGVRRVDERPVGAEPQYPIRPMVPHPG DIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWG PRFKKLADMYGGGEED |