| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
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|---|---|
Gene ID | 1105 |
Name | CHD1 |
Synonym | -;chromodomain helicase DNA binding protein 1;CHD1;chromodomain helicase DNA binding protein 1 |
Definition | ATP-dependent helicase CHD1|CHD-1|chromodomain-helicase-DNA-binding protein 1 |
Position | 5q15-q21 |
Gene Type | protein-coding |
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TSG scores |
Description |
| TUSON ranking | 4867 |
TUSON P-value | 1 |
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External Links |
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Links to Entrez Gene | 1105 |
Links to all GeneRIF Items | 1105 |
Links to iHOP | 1105 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>1105 : length: 5133 atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg gatgatgattctgggtcagcttcaggctctggatctggttcgagttctggaagcagtagt gatggaagcagtagccagtcaggtagcagtgactctgactccggatctgaatcaggcagt cagtcagagtctgagtcagacacttcccgagaaaacaaagttcaagcaaaaccaccgaaa gttgatggagctgagttttggaaatctagtcctagtattctggccgttcagagatctgca atcctcaagaagcagcaacagcagcagcagcaacaacaacatcaagcctcatctaatagc ggatcagaagaggattcctctagcagtgaagattccgatgactcatcaagtgaggtcaaa aggaaaaagcataaagatgaagattggcaaatgtctgggtcaggatctccatctcagtct ggttcagattcagaatctgaagaagagagagagaaaagcagttgtgatgaaacagaatct gattatgagccaaaaaacaaagtcaaaagcagaaaacctcaaaatagatctaagtcaaaa aatggaaagaagattcttggacaaaaaaagagacagattgattcatctgaggaggatgat gatgaagaagattatgataatgataaaagaagttctcgtcgccaagcaactgttaatgtt agctataaggaggatgaagaaatgaaaacagattctgatgacctactggaagtctgtgga gaggatgttcctcaacctgaggaagaggaatttgaaaccatagaaagatttatggattgt cggattgggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagat ggtgacccaaatgcaggctttgaaaaaaacaaagaaccaggagagattcagtatttaatt aaatggaaaggatggtcccatatccacaacacttgggagacagaagaaaccctcaagcag cagaatgttagaggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaa agatggttgaaaaatgcctctccagaagatgtggaatattataattgccagcaagaactt acagatgatctacataaacagtatcaaatagtggaacgtataattgctcattccaatcaa aagtcagcagctggttatcctgattattactgcaaatggcagggccttccatactcagag tgcagctgggaagatggagctctcatttccaaaaagtttcaagcatgcattgatgagtat tttagcaggaaccaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaagg ccaaggtttgtagccctgaagaagcagccatcctatattggaggacatgagggcttagaa ttaagagattatcaactgaatggtttaaattggcttgctcattcttggtgcaaaggaaat agttgcatactcgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctg aattatttgtttcatgaacatcaattatatggaccttttttattggtagtaccgctctcc actcttacttcctggcaaagggaaattcagacttgggcttctcaaatgaatgctgtggtt tatttaggtgacattaacagcagaaacatgataagaactcatgaatggacgcatcatcag accaaacggttaaaatttaatatattgttaacaacttatgaaattttattaaaagataag gcattccttggaggtctaaattgggcatttataggtgttgatgaagcacaccgattaaag aatgatgactcccttctgtataaaactttaatagattttaaatccaatcatcgtctcctt atcactggaactcctctacagaattccctcaaagagctctggtctttgctacatttcatt atgccagaaaagttttcttcctgggaagattttgaagaagaacatggcaaagggagagaa tatggttatgcaagccttcacaaggagcttgagccatttctgttacgccgagttaagaaa gatgtggaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgct ttacagaaacaatattacaaatggattttaactaggaattacaaagccctcagcaaaggt tccaagggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaac cattgctacctcattaaaccaccagataataatgaattctataataaacaggaggcctta caacacttaattcgtagtagcggaaaattgattcttcttgacaagctattaattcgccta agagaacgaggcaatcgagttcttattttttcacaaatggtgcggatgttagatatactt gcagaatatttgaaatatcgtcaattcccctttcaaagattagatggatcaataaaagga gaactgaggaaacaagctctagatcattttaatgctgagggatcagaggatttttgcttt ttgctgtccacaagagctggaggtctagggattaatttagcctctgctgacactgttgtt atatttgattccgattggaatccacagaatgatcttcaggcacaggctagagcccatcga attgggcaaaagaaacaggtgaatatttatcgtctagttacaaagggatcagttgaagaa gatattcttgaaagggcgaaaaagaagatggttttagatcatcttgtaattcaaagaatg gacacaactgggaagacagtactacatacaggttctgccccatcaagttctactcctttc aataaagaagagttatcagccattttaaagtttggtgctgaagaactttttaaggaacct gaaggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagagctgaa actcatgaaaatgaaccaggtcctttaactgtaggagatgaattgctttcccagttcaag gttgccaacttctcaaatatggatgaggatgacattgagttggaacctgaaagaaattca aagaattgggaggaaattattccagaagatcaaagaagacgattagaagaagaagaaaga caaaaggaacttgaagaaatttatatgctcccaagaatgagaaattgtgcaaaacagatt agtttcaatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagt gattccatctcagaagggaaaaggccaaagaaacgtggaagaccacggactattcctcgg gagaatattaaaggatttagtgatgcagaaattaggcggtttatcaagagctataagaaa tttggtggtcctctggaaagattagatgcaattgctcgagatgctgagttagttgataag tcagaaacagaccttagacgactgggagaattggtacataatggttgcattaaagcatta aaggatagttcttcaggaacagaacgaacaggtggtagactcggaaaagtgaagggtcca acattccgaatatcaggagtacaggtgaatgccaaactagtcatctcccatgaagaagaa ttaatacctttgcacaaatccattccttctgatccagaagaaagaaagcagtatactatc ccatgccacacaaaggcagctcattttgatatagactggggcaaagaagatgattccaat ttgttaattggcatctatgaatatggatatggaagctgggaaatgattaaaatggatcct gacctcagtctaacacacaagattcttccagatgatcccgataaaaaaccacaagcaaaa cagttgcagacccgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaa gaagctctttctggtgcgggaagttcaaagaggagaaaagcaagagctaagaagaataaa gcaatgaagtctataaaagtgaaagaggaaataaagagtgattcttctcctctgccttca gagaagtctgatgaagatgatgataaattgagtgaatccaagtctgatggtagggaaaga tccaagaaatcttcagtgtcagatgctccagttcatatcacggcaagtggtgaaccagtt cccatttctgaagaatctgaagagctggatcagaagacattcagcatttgtaaagaaaga atgaggcctgttaaagcagctttgaaacaacttgataggcctgagaaaggcctttcagaa agagaacaactagagcatactagacaatgtttaataaaaattggagaccatatcacagaa tgtctaaaagagtatacaaatcctgaacaaattaagcaatggagaaaaaacctgtggatt tttgtatctaagtttactgaatttgatgcaagaaaattacataaattatataagcatgct attaaaaaacggcaggagtctcagcaaaacagtgatcaaaacagcaacttgaatcctcac gtgattagaaatccagatgtggaaagattaaaagagaatacaaatcacgatgatagcagc agggacagttattcctctgatagacacttaactcagtaccatgatcatcataaagaccga catcagggagattcttacaaaaaaagtgattccaggaaaagaccctattcttcttttagt aatggtaaagaccatcgtgattgggatcactacaagcaagacagcagatattacagtgac agagagaaacacagaaaactggatgatcacaggagtagagatcacaggtcaaatttggaa ggaagtttaaaagatagatctcattctgatcatcgttctcactcagatcatcggttacat tcagaccaccggtcaagttctgaatatacgcaccataaatcttccagggattataggtat cactcagactggcaaatggaccacagagcttccagcagtggccctaggtcaccactagat cagagatctccttatggctccagatctccatttgaacattcagttgaacacaaaagtaca ccggagcatacctggagtagtcggaaaacataa |
Protein Sequence |
>1105 : length: 1710 MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAILKKQQQQQQQQQHQASSNS GSEEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEEREKSSCDETES DYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEDDDEEDYDNDKRSSRRQATVNV SYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEAD GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETK RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE CSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLE LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI MPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL QHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPF NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFK VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI SFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKK FGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGP TFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSN LLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKK EALSGAGSSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLSESKSDGRER SKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSE REQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHA IKKRQESQQNSDQNSNLNPHVIRNPDVERLKENTNHDDSSRDSYSSDRHLTQYHDHHKDR HQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLE GSLKDRSHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQMDHRASSSGPRSPLD QRSPYGSRSPFEHSVEHKSTPEHTWSSRKT |