| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
|
|---|---|
Gene ID | 23347 |
Name | SMCHD1 |
Synonym | -;structural maintenance of chromosomes flexible hinge domain containing 1;SMCHD1;structural maintenance of chromosomes flexible hinge domain containing 1 |
Definition | SMC hinge domain-containing protein 1|structural maintenance of chromosomes flexible hinge domain-containing protein 1 |
Position | 18p11.32 |
Gene Type | protein-coding |
|
TSG scores |
Description |
| TUSON ranking | 15386 |
TUSON P-value | 1 |
|
External Links |
|
Links to Entrez Gene | 23347 |
Links to all GeneRIF Items | 23347 |
Links to iHOP | 23347 |
|
Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>23347 : length: 6018 atggcagcggcggacggcggcgggcctggtggggcctctgtggggactgaggaggatggc ggaggcgtcggccacaggacggtgtacttgtttgatcggcgcgaaaaggagtccgagctc ggggaccggcctctgcaggtcggggagcgctcggactacgcgggatttcgcgcgtgtgtg tgtcagacacttggcatttcacctgaagaaaaatttgttattacaacaacaagtaggaaa gaaattacctgtgataattttgatgaaactgttaaagatggagtcaccttatacctgcta cagtcggtcaatcagttactactgacagctacgaaagaacgaattgacttcttacctcac tatgacacactggttaaaagtggcatgtatgaatattatgccagtgaaggacaaaatcct ttgccatttgctcttgcggaattaattgacaattcattgtctgctacttctcgtaacatt ggggttagaagaatacagatcaaattgctttttgatgaaacacaaggaaaacctgctgtt gcagtgatagataatggaagaggaatgacctctaaacagcttaacaactgggccgtgtat aggttgtcaaaattcacaaggcaaggtgactttgaaagtgatcattcaggatatgttcgt ccagtaccagtgccacgcagtttaaatagtgatatttcctattttggtgttgggggcaag caagctgtcttctttgttggacaatcagccagaatgataagcaaacctgcagattcccaa gatgttcacgagcttgtgctttctaaagaagattttgagaagaaggagaaaaataaagag gcaatatatagtggatatattagaaacagaaagccctctgattctgttcacattacaaat gatgatgaaagatttctacatcatcttatcatagaggagaaggaaaaagatagctttact gctgtggttatcacaggggtacaaccagaacacatacagtacttgaaaaattatttccac ctttggacacgacagttagcgcatatttatcactactatattcatggcccaaaaggaaat gaaatacgaacatcaaaagaagttgaacctttcaacaatattgatattgaaatttctatg tttgaaaaagggaaggtacctaagattgtcaacctaagggaaatacaagacgacatgcag acgttgtatgtaaacacagcagctgatagttttgaattcaaagctcatgttgaaggagat ggtgtagtggaagggattatccgttatcatccattcttatatgatagagaaacttaccct gatgatccatgctttccatcaaaattaaaagatgaagatgatgaagatgattgtttcata cttgagaaagcagctagagggaaaaggcctatttttgaatgtttttggaatggacgatta ataccatatacatcagttgaagactttgactggtgtactcctcctaagaagagagggctt gcaccaattgaatgctacaataggatatctggtgcattattcactaatgacaaattccag gtcagcacaaataaattgacgtttatggatcttgagctaaaattgaaagataagaacacc ctttttacaaggattttaaatggacaggaacagcgaatgaaaattgacagagaatttgct ttgtggctgaaggactgtcatgagaagtatgataaacaaataaaatttacactttttaag ggagtaattacacgtcctgatcttccttctaaaaagcaaggtccctgggcaacatatgca gcaatagaatgggatggaaagatatacaaagcaggacagctggtcaagacaatcaagaca cttcccctcttttatggaagcatagtaagattttttctttatggcgatcatgatggagaa gtatatgctacaggaggagaggttcaaattgcaatggaacctcaggcactatatgatgaa gtaagaactgtgccaattgcaaagctggataggacagttgctgagaaagctgttaaaaaa tatgtagaagatgaaatggcaaggctccctgatagattgtcagtaacttggcctgaagga gatgaattattgcctaatgaggttaggcctgctggaacccctattggtgcgttaagaatt gaaatactgaataaaaaaggggaagcaatgcaaaagcttccaggaacaagccatggaggg tcaaagaaactcctggttgagctcaaagttattttacattcttcaagtggaaataaagag attatttcgcatattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaa aatattcagaagttggggaattataccttgaaattacaagttgtgttgaatgaaagtaat gcagacacttatgcaggaagaccactaccatctaaagcaattaagttttctgttaaagag ggtaagccagagaaattttcatttggtcttctggatcttccttttcgtgttggagttcca tttaatatccctctggagtttcaggatgaatttggtcataccagtcaactagtaactgat attcagccagttcttgaagcaagtggtttatctttacattatgaagaaataaccaaagga ccaaattgtgtaattcgaggtgttacagccaagggccctgtaaactcttgtcaaggcaag aattataatctgaaggttactctgcctggcttaaaagaagactcacagattttgaaaatt agattactacctggtcaccctcgtcgactgaaagtgaaacctgattctgaaattttagtt atagaaaatggaacagctttcccatttcaggtggaagttttagatgaatcagacaacata acagcacaaccaaaattgattgttcattgtaagttttcaggtgctccaaaccttccagtc tatgttgtagattgcagtagttctggaaccagtattttaacaggatctgcaattcaagtt cagaatattaaaaaagaccagacgcttaaagcaagaattgaaatacctagttgtaaagat gtggcacctgtggagaagactattaagttgcttcccagtagccatgttgcaagactacaa atattcagtgtagaaggacaaaaggcaattcagatcaaacatcaggatgaggttaattgg atagcgggtgatattatgcataatcttatttttcaaatgtatgatgaaggagaaagagaa atcaatataacatcagctttagcagaaaaaattaaagttaattggactcctgagattaac aaagaacacttgctacagggtctgcttcctgatgtgcaagtaccaacatctgtaaaagat atgcgctattgccaggtttcattccaagatgatcatgtgtctttggaaagtgcgtttaca gtaagaccacttcctgatgaacctaaacatttaaaatgtgaaatgaaaggaggaaaaaca gtacagatgggccaagagcttcaaggagaagtagttataataattacagatcagtacgga aatcagattcaagcattttcaccaagttctttatcttctttgtcaattgctggggttgga cttgatagctcaaatttgaaaacaacctttcaggaaaacacacagagtataagtgtaaga ggcatcaaatttattccaggtcctcctggaaataaggatctttgttttacttggcgtgag ttttctgactttattcgagtgcaactaatttctggacctcctgctaaacttctccttata gactggccagaactaaaggagtccattccagtgattaatggaagagatttacagaaccct attattgttcaactttgtgatcagtgggataatccagcaccggtacaacatgttaaaata agtcttacaaaagctagcaatttaaagctcatgccttcaaaccaacagcataaaacagat gagaaaggcagggctaatttgggagtattcagtgtttttgcccctaggggagagcatact cttcaggttaaagccatctataacaaaagtatcatagaaggacctataattaagttaatg attcttccagacccagaaaaacccgttcgtctcaatgttaaatatgacaaagatgcatcc ttcttagcagggggtcttttcactgattttatgattagtgttatttctgaagatgacagt atcattaaaaacattaatccagcacgtatttccatgaaaatgtggaagctgtctaccagt gggaaccgacccccagcaaatgcagaaacatttagttgtaataaaataaaagataatgac aaagaagatggctgcttctatttcagggataaagtaattcctaataaagtggggacatat tgtatccagtttggttttatgatggataaaacaaatattctcaacagtgaacaggttata gttgaagtcctgcctaatcaacctgtgaagttagtacctaaaattaaaccacctacacca gctgtttcaaatgttcgctcagttgccagtaggaccttggtcagagatctacatcttagt atcacggatgactacgacaaccatactggaattgatttggttggcactataatagccacc attaaaggctctaatgaggaagatactgataccccactttttattgggaaagttagaaca cttgaattccccttcgtgaatggttcggctgaaatcatgagtctggtgctggcagaaagt agtcctggaagggatagtactgaatattttattgtatttgagccccggctaccactttta tcaagaaccttagaaccatatatcctaccgttcatgttttacaatgatgttaagaagcag caacaaatggcagcacttacaaaagaaaaggaccaattatctcagtctattgttatgtat aaaagtttatttgaagccagccaacagcttcttaatgaaatgaaatgtcaagttgaagaa gcaagattaaaagaggcccaattgcgaaatgaactaaaaatacataatattgacattcct acaacacaacaggtgccacacattgaagcacttctgaaaagaaagctatcagaacaagaa gaactgaagaaaaaacctagaagatcgtgtactcttccaaactatactaaaggcagtgga gatgttttgggaaagattgcacatctagcacaaattgaagatgatagagctgcgatggtt atttcttggcatctggcaagtgacatggactgtgtagtcaccctaaccactgacgctgca cgtcgtatctatgatgaaacccaaggtcgtcagcaggtgttgccccttgattctatttac aagaagactcttccagattggaaaagatctctacctcatttccgaaatggaaaattgtat tttaaacccattggagatccagtctttgctcgagacttgttaacatttccagataatgta gaacattgtgaaacagtatttggtatgctgttaggagacaccattattttggataatctg gatgcggccaatcattatagaaaagaggttgttaaaattacacactgtcctacactgctg accagagatggagatcgaattcgaagtaatggaaagtttgggggccttcagaataaagct cctccaatggataaacttcggggaatggtatttggagctccagttccaaaacagtgtctg atcttaggggaacaaatagatcttcttcagcagtatcgttctgctgtgtgcaaactagac agtgtgaataaggatcttaacagtcaattagagtaccttcgcactccggatatgaggaag aaaaagcaagaacttgatgaacatgagaaaaatctcaaactaatagaggaaaaactaggt atgactcccatacgtaagtgtaatgactcattgcgtcattcaccaaaggttgagacgaca gattgtccagttcctcctaaaagaatgagacgagaagctacaagacaaaataggattata accaaaacagatgtatga |
Protein Sequence |
>23347 : length: 2005 MAAADGGGPGGASVGTEEDGGGVGHRTVYLFDRREKESELGDRPLQVGERSDYAGFRACV CQTLGISPEEKFVITTTSRKEITCDNFDETVKDGVTLYLLQSVNQLLLTATKERIDFLPH YDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNIGVRRIQIKLLFDETQGKPAV AVIDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGK QAVFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITN DDERFLHHLIIEEKEKDSFTAVVITGVQPEHIQYLKNYFHLWTRQLAHIYHYYIHGPKGN EIRTSKEVEPFNNIDIEISMFEKGKVPKIVNLREIQDDMQTLYVNTAADSFEFKAHVEGD GVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDEDDCFILEKAARGKRPIFECFWNGRL IPYTSVEDFDWCTPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNT LFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGVITRPDLPSKKQGPWATYA AIEWDGKIYKAGQLVKTIKTLPLFYGSIVRFFLYGDHDGEVYATGGEVQIAMEPQALYDE VRTVPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEVRPAGTPIGALRI EILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKME NIQKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDLPFRVGVP FNIPLEFQDEFGHTSQLVTDIQPVLEASGLSLHYEEITKGPNCVIRGVTAKGPVNSCQGK NYNLKVTLPGLKEDSQILKIRLLPGHPRRLKVKPDSEILVIENGTAFPFQVEVLDESDNI TAQPKLIVHCKFSGAPNLPVYVVDCSSSGTSILTGSAIQVQNIKKDQTLKARIEIPSCKD VAPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMHNLIFQMYDEGERE INITSALAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFT VRPLPDEPKHLKCEMKGGKTVQMGQELQGEVVIIITDQYGNQIQAFSPSSLSSLSIAGVG LDSSNLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLI DWPELKESIPVINGRDLQNPIIVQLCDQWDNPAPVQHVKISLTKASNLKLMPSNQQHKTD EKGRANLGVFSVFAPRGEHTLQVKAIYNKSIIEGPIIKLMILPDPEKPVRLNVKYDKDAS FLAGGLFTDFMISVISEDDSIIKNINPARISMKMWKLSTSGNRPPANAETFSCNKIKDND KEDGCFYFRDKVIPNKVGTYCIQFGFMMDKTNILNSEQVIVEVLPNQPVKLVPKIKPPTP AVSNVRSVASRTLVRDLHLSITDDYDNHTGIDLVGTIIATIKGSNEEDTDTPLFIGKVRT LEFPFVNGSAEIMSLVLAESSPGRDSTEYFIVFEPRLPLLSRTLEPYILPFMFYNDVKKQ QQMAALTKEKDQLSQSIVMYKSLFEASQQLLNEMKCQVEEARLKEAQLRNELKIHNIDIP TTQQVPHIEALLKRKLSEQEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMV ISWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRSLPHFRNGKLY FKPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLL TRDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLILGEQIDLLQQYRSAVCKLD SVNKDLNSQLEYLRTPDMRKKKQELDEHEKNLKLIEEKLGMTPIRKCNDSLRHSPKVETT DCPVPPKRMRREATRQNRIITKTDV |