| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
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|---|---|
Gene ID | 5101 |
Name | PCDH9 |
Synonym | -;protocadherin 9;PCDH9;protocadherin 9 |
Definition | cadherin superfamily protein VR4-11|protocadherin-9 |
Position | 13q21.32 |
Gene Type | protein-coding |
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TSG scores |
Description |
| TUSON ranking | 12424 |
TUSON P-value | 1 |
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Pathways and Diseases |
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Pathway | Wnt signaling pathway;PANTHER;P00057 |
Pathway | Cadherin signaling pathway;PANTHER;P00012 |
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External Links |
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Links to Entrez Gene | 5101 |
Links to all GeneRIF Items | 5101 |
Links to iHOP | 5101 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>5101 : length: 3612 atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtttccagc agcactggggaaattttcacaacctccaacagaatagacagagaaaaactctgtgctggc gcctcatatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat gatttcttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccagagggagagaag tggccacaactgattgttcagcaaaacttggatagagaacagaaagatacctatgtgatg aaaatcaaagtagaggatggaggcactccacagaaatccagtacggccatactgcaggtc acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat attccagagaatgctcccgtaggtacctctgtaattcagctccatgccactgatgcagat ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa agactctttgctttaaataatactactgggctgattacagttcagaggtccttagataga gaggagacagccattcacaaagtgacagtgctggctagtgacggcagctccactcctgct cgagcaacggttaccatcaatgtcaccgatgtaaatgataaccctcctaatatagacctc aggtacattataagtcccatcaatggcaccgtgtatttatctgagaaagatcctgtcaat acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc tgttttattgaaagagaggtcccatttcatttgaaggcggtatatgacaaccaatatttg ttagagacctcttctttgttggactatgagggcaccaaagaattcagctttaaaattgtt gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaaa acaggagttttgacagcctccagagtatttgacagagaagaacaagaacgattcattttt acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgattgtt actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc tacacttttgatgtcaaagccactgatggaggacaaccacctcgttcctctactgcaaaa gtaactatcaacgtcatggatgtcaatgacaacagcccagttgtcatttctccaccgtct aatacttcctttaagttggtgcccctctcagccattcctggctccgtggtagcagaagtt tttgcagtggatgttgacactggaatgaacgctgaactaaagtatactatagtgagtgga aacaataaaggcttattccggattgatccagtaacaggtaacattactctggaagaaaaa ccagcacctactgatgtgggattgcatcgtttggtggtcaacataagtgacctggggtac cctaagtctttgcacacgcttgtgcttgtattcctttatgttaacgacactgctggaaat gcctcctatatctatgacttgatccgcaggactatggagaccccgttggacaggaacata ggggatagtagccaaccctatcaaaatgaggactatctaaccatcatgattgccatcatc gccggtgccatggtggtcattgttgtgatcttcgtcaccgttctggtgcgctgtcgccat gcatcaaggttcaaagcagctcagaggagcaagcaaggtgccgaatggatgtccccaaac caggagaacaagcaaaacaagaaaaagaaaagaaagaaaaggaagtctcccaaaagctct cttttgaactttgttactatcgaagagtccaaacccgatgatgcagttcatgaacctatc aatgggacaataagcctgccggctgaactggaggagcaaagtataggaagatttgactgg ggcccggcacctccaacaacattcaagcctaacagtcctgacctggccaagcactacaaa tctgcttctccacagcctgcttttcatctcaaaccagacactccagtttccgtgaaaaag caccacgtgattcaggaactccctttggacaacacctttgttgggggttgtgacaccctt tctaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga ggcttcaagacaaagggccccttacacaccagacagtcgcagcgccgtgttacgtttcat ctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccatgagccggtg ggtagtggaaccctgatctcacaccctcttcctctggttcagccacaggacgaattctat gaccaggcctctccggacaagaggactgaagcagatggcaactctgatcccaactctgat gggcctttgggtccccgaggattagctgaagctacagagatgtgcactcaagagtgcttg gttttgggtcactctgataattgctggatgcctcctggcttgggtccatatcaacacccc aaatctcctctctcaacctttgcaccccagaaagaatgggtgaagaaggacaagcttgtg aatgggcacaccctgaccagagcctggaaagaagacagcaacaggaaccagttcaatgac cgtaagcagtatggctccaatgaaggccatttcaacaatggcagccacatgacagacatt cctctggcaaatctgaagtcttataagcaagcaggaggtgctactgagagtcctaaggag caccaactctaa |
Protein Sequence |
>5101 : length: 1203 MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSG NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIIAGAMVVIVVIFVTVLVRCRH ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH LPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLV NGHTLTRAWKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQAGGATESPKE HQL |