| General information | Literature | Expression | Regulation | Variant | Interaction |
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Basic Information |
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|---|---|
Gene ID | 51780 |
Name | KDM3B |
Synonym | 5qNCA|C5orf7|JMJD1B|NET22;lysine (K)-specific demethylase 3B;KDM3B;lysine (K)-specific demethylase 3B |
Definition | jmjC domain-containing histone demethylation protein 2B|jumonji domain containing 1B|jumonji domain-containing protein 1B|lysine-specific demethylase 3B|nuclear protein 5qNCA |
Position | 5q31 |
Gene Type | protein-coding |
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TSG scores |
Description |
| TUSON ranking | 280 |
TUSON P-value | 0.002420342 |
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External Links |
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Links to Entrez Gene | 51780 |
Links to all GeneRIF Items | 51780 |
Links to iHOP | 51780 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>51780 : length: 5286 atggcggacgcggcggcctccccggtgggcaagcggctgctgctgctgttcgcggacact gcggcctcagcctcggcctcggctcccgcggcggcagcggcgagcggagatccggggcct gcgctgcgcactcgagcctggcgggccggcacggtgcgggccatgagcggggcggtgccc caggacctagcgatctttgtagaatttgatggctgtaactggaagcaacactcctgggta aaagttcatgctgaggaagttatcgtgcttctgctggaagggtctcttgtatgggcgccc cgtgaggacccagtccttctccagggcattcgagtctccattgcacaatggccagccctg acttttactccccttgtagataaactgggtttgggttctgtggttccagtggaatatctt ctggatcgagagcttcggttcctgtcagatgccaatgggttgcatctgtttcagatggga acagatagccaaaaccagattcttttggaacatgctgcactgagagaaacagttaatgct ttgatcagtgaccaaaagctacaagagatattcagccgaggtccctacagtgttcaaggt cacagggtcaaaatatatcagccagagggggaagaagggtggctctatggtgttgtgagc catcaggactccatcactcgtcttatggaggtgtctgtaactgagagtggtgagatcaag tcggtagatcccagactaatccatgtgatgctgatggataattcaacgcctcaaagcgag gggggtacgttaaaagcagtaaaatcttccaaaggaaagaagaagagagaaagcatagag gggaaagatggccggaggaggaaaagtgcttcggactctgggtgtgaccctgcatcaaag aaattaaaaggagacaggggtgaagtagacagtaatgggagcgatggaggtgaggcaagc cgagggccctggaaaggagggaatgccagtggagagccagggctggatcagagagccaag cagccaccgtctacatttgtcccccagataaaccgcaacattcgctttgccacttacacc aaagaaaacggcaggactctggtggtgcaggatgagcctgtaggtggggacacacctgca tctttcactccatattctacagccacaggtcagacacctttggccccagaggtgggtgga gccgaaaacaaagaggcaggaaaaacactggaacaagttggccagggcatagtggcttcc gcagctgtggtcactaccgccagctccaccccaaacacagtgaggatctcagacactggc cttgcagcagggactgtgccagaaaaacagaaaggcagccggtcgcaggcctcgggagag aattcaagaaattctattctggcctcttctggatttggagcacctctccctagttcatcg caacctttgacttttggaagtggaaggagccagtccaatggtgttctagccacagagaac aaacctttgggcttctcttttggctgtagctctgcacaagaggcacagaaagacactgat ctctccaaaaacttgttttttcaatgcatgtcccaaactttacctaccagtaactacttc actactgtttcagagagtttggctgatgattcttctagtcgggactcattcaaacaaagc cttgagagcctgagctcaggcctgtgtaaaggcagatccgttcttggaacagacactaag ccaggctctaaggctggcagctctgtggaccggaaagtgcctgcagagtccatgcccacc ctcactccagccttcccacggagcctcctaaatgcccgtaccccagagaatcatgaaaat ctatttttacagccccccaaattgtcccgagaagagccttctaatcctttcctggcattt gtggagaaagttgaacacagccctttcagtagttttgcatctcaggcatcaggtagctcc tcttctgctaccactgtcacctccaaggtggcacccagctggcccgagtctcactcctct gcagattcggcatctttagcaaagaagaaacccctcttcattacaactgactcctccaag ctagtatctggtgttctgggctcagctcttaccagtgggggcccaagcctctctgccatg gggaatggccgctccagctcgcccaccagcagcctcactcagcccattgagatgccaact ctctcctctagccccacagaggagaggccaactgtggggcctgggcagcaggacaatccc ctcctcaaaacctttagtaacgtctttggcaggcactcaggcggctttctgtcctccccg gcagatttttcacaggagaacaaagctccttttgaagctgtgaaaaggttctcactggat gaacgaagcttggcttgcagacaagactcggactccagcaccaacagtgacctgtcagat ttgagtgactctgaggagcagctgcaggctaagacaggcctgaagggaattccagagcac ctgatggggaagctgggccccaatggggagcgcagtgctgagctgttgctgggcaaaagc aaagggaagcaggcccccaagggccggcctcggactgcccccctgaaagttggccagtca gtgctgaaagatgtaagcaaagtgaagaagctgaagcaatctggagagcccttcctgcag gatgggtcatgcatcaatgtggcacctcatctgcacaagtgtcgtgaatgccgcctggag cggtaccggaagtttaaggaacaggagcaagatgattctactgtagcctgccgtttcttt cacttccggaggttgatcttcactcgaaaaggggtactccgtgtggaggggtttttaagc ccccagcaaagtgaccctgatgccatgaacctgtggattccctcttcctccctagcagaa gggatagatctagagacctcaaaatacatcctggccaatgttggggaccagttctgccag ctcgtaatgtctgagaaggaggccatgatgatggtggagccacaccagaaagtggcatgg aagcgagctgtgcgtggtgtacgggagatgtgtgatgtgtgtgaaacaactctcttcaac atccactgggtttgtcgcaaatgtggatttggggtctgccttgactgttaccggctcagg aaaagccggccacgcagtgagacagaagagatgggtgatgaagaagttttctcctggttg aagtgtgcaaagggacagtcccacgaaccagagaatctcatgcccacacaaattattcct ggcacagctctttacaatattggagacatggtacatgctgcccggggcaagtggggaatt aaagcaaactgcccttgtatcagtcgacagaacaaatctgtattgagacctgccgtcacc aatgggatgtcacagcttcctagcataaaccctagtgcctcttctggaaacgaaactacc ttctctggtggaggaggaccggcaccagtaacaactccagagccggaccatgttcccaaa gccgacagcactgacatcagatctgaagagcctctgaaaacagacagttcggcatcaaat agcaatagtgaactgaaagccatcaggcctccttgccctgacacggccccaccctcctcc gccctgcactggttggcagatttagcaactcagaaggctaaagaagaaacaaaagaagca gggtccctgaggtcggtgctcaataaagagtctcattcaccctttgggctggactcgttc aactccactgcaaaggtctctccgctgactccaaagctttttaacagtctgttgctgggt cccactgcctccaacaacaaaaccgaagggtctagccttcgagacctccttcactccggg ccgggaaaacttcctcaaacccccttggacacaggcataccctttcccccggtcttctct acatcctcagcaggagtgaagagcaaggccagcctacccaactttcttgaccacatcatt gcctcagtggtagaaaataagaaaacctcagatgcttcaaagcgggcctgcaacttgact gatacccagaaggaagtgaaggagatggtgatggggttaaatgtgctagatccccatact tctcactcctggctttgtgatgggaggcttctgtgtctccatgaccccagcaacaaaaac aattggaagatcttccgggagtgttggaagcaaggtcagccagtgctggtttcgggggta cataaaaagctcaagtctgagctctggaagccagaagcctttagccaggaatttggagac caggatgtagacttggtgaactgcaggaactgtgctataatttccgatgtgaaagttcgg gatttctgggatggtttcgagatcatatgcaaacgactacggtcagaagatgggcagcca atggtgctcaaactcaaggactggcctcctggggaagattttcgagacatgatgccaacc aggtttgaagatctgatggagaaccttcctctgccagaatataccaaacgagatggcagg ctcaatctggcctctaggctacctagctactttgtaaggcctgatctgggccccaagatg tacaacgcctatgggttgataacagcagaagatagaagagttggtacaacaaatcttcac ttagatgtgtctgatgctgttaatgtgatggtgtatgttgggattcccatcggggagggt gctcatgatgaagaggtactcaagacaattgacgagggagatgccgatgaggtgacgaag cagaggattcatgatggaaaagagaagccaggtgctttatggcacatctatgcagccaag gatgcagagaagatccgggagctgctccgaaaggttggagaagaacaaggccaagagaac ccccctgatcatgacccaattcatgaccaaagttggtacctggaccagaccctccgtaag cgactctatgaggagtatggcgtgcaaggctgggctattgtgcagttcctaggtgatgct gttttcatacctgctggagccccacaccaggttcacaatctatacagttgcataaaagta gcagaagactttgtatctccagaacatgtaaagcactgtttccgcctgactcaggaattc aggcatctctctaacactcatacaaatcatgaggataaactgcaggtgaagaacatcatt taccatgcagtgaaagatgcggttggcaccctcaaggctcatgaatccaaactggcaagg tcctag |
Protein Sequence |
>51780 : length: 1761 MADAAASPVGKRLLLLFADTAASASASAPAAAAASGDPGPALRTRAWRAGTVRAMSGAVP QDLAIFVEFDGCNWKQHSWVKVHAEEVIVLLLEGSLVWAPREDPVLLQGIRVSIAQWPAL TFTPLVDKLGLGSVVPVEYLLDRELRFLSDANGLHLFQMGTDSQNQILLEHAALRETVNA LISDQKLQEIFSRGPYSVQGHRVKIYQPEGEEGWLYGVVSHQDSITRLMEVSVTESGEIK SVDPRLIHVMLMDNSTPQSEGGTLKAVKSSKGKKKRESIEGKDGRRRKSASDSGCDPASK KLKGDRGEVDSNGSDGGEASRGPWKGGNASGEPGLDQRAKQPPSTFVPQINRNIRFATYT KENGRTLVVQDEPVGGDTPASFTPYSTATGQTPLAPEVGGAENKEAGKTLEQVGQGIVAS AAVVTTASSTPNTVRISDTGLAAGTVPEKQKGSRSQASGENSRNSILASSGFGAPLPSSS QPLTFGSGRSQSNGVLATENKPLGFSFGCSSAQEAQKDTDLSKNLFFQCMSQTLPTSNYF TTVSESLADDSSSRDSFKQSLESLSSGLCKGRSVLGTDTKPGSKAGSSVDRKVPAESMPT LTPAFPRSLLNARTPENHENLFLQPPKLSREEPSNPFLAFVEKVEHSPFSSFASQASGSS SSATTVTSKVAPSWPESHSSADSASLAKKKPLFITTDSSKLVSGVLGSALTSGGPSLSAM GNGRSSSPTSSLTQPIEMPTLSSSPTEERPTVGPGQQDNPLLKTFSNVFGRHSGGFLSSP ADFSQENKAPFEAVKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKTGLKGIPEH LMGKLGPNGERSAELLLGKSKGKQAPKGRPRTAPLKVGQSVLKDVSKVKKLKQSGEPFLQ DGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLS PQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAW KRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKSRPRSETEEMGDEEVFSWL KCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCISRQNKSVLRPAVT NGMSQLPSINPSASSGNETTFSGGGGPAPVTTPEPDHVPKADSTDIRSEEPLKTDSSASN SNSELKAIRPPCPDTAPPSSALHWLADLATQKAKEETKEAGSLRSVLNKESHSPFGLDSF NSTAKVSPLTPKLFNSLLLGPTASNNKTEGSSLRDLLHSGPGKLPQTPLDTGIPFPPVFS TSSAGVKSKASLPNFLDHIIASVVENKKTSDASKRACNLTDTQKEVKEMVMGLNVLDPHT SHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGD QDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPT RFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLH LDVSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDADEVTKQRIHDGKEKPGALWHIYAAK DAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDA VFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNII YHAVKDAVGTLKAHESKLARS |