| General information | Literature | Expression | Regulation | Variant | Interaction |
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Basic Information |
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|---|---|
Gene ID | 54790 |
Name | TET2 |
Synonym | KIAA1546|MDS;tet methylcytosine dioxygenase 2;TET2;tet methylcytosine dioxygenase 2 |
Definition | methylcytosine dioxygenase TET2|probable methylcytosine dioxygenase TET2|tet oncogene family member 2 |
Position | 4q24 |
Gene Type | protein-coding |
|
TSG scores |
Description |
| TUSON ranking | 78 |
TUSON P-value | 4.67E-07 |
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External Links |
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Links to Entrez Gene | 54790 |
Links to all GeneRIF Items | 54790 |
Links to iHOP | 54790 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>54790 : length: 6009 atggaacaggatagaaccaaccatgttgagggcaacagactaagtccattcctgatacca tcacctcccatttgccagacagaacctctggctacaaagctccagaatggaagcccactg cctgagagagctcatccagaagtaaatggagacaccaagtggcactctttcaaaagttat tatggaataccctgtatgaagggaagccagaatagtcgtgtgagtcctgactttacacaa gaaagtagagggtattccaagtgtttgcaaaatggaggaataaaacgcacagttagtgaa ccttctctctctgggctccttcagatcaagaaattgaaacaagaccaaaaggctaatgga gaaagacgtaacttcggggtaagccaagaaagaaatccaggtgaaagcagtcaaccaaat gtctccgatttgagtgataagaaagaatctgtgagttctgtagcccaagaaaatgcagtt aaagatttcaccagtttttcaacacataactgcagtgggcctgaaaatccagagcttcag attctgaatgagcaggaggggaaaagtgctaattaccatgacaagaacattgtattactt aaaaacaaggcagtgctaatgcctaatggtgctacagtttctgcctcttccgtggaacac acacatggtgaactcctggaaaaaacactgtctcaatattatccagattgtgtttccatt gcggtgcagaaaaccacatctcacataaatgccattaacagtcaggctactaatgagttg tcctgtgagatcactcacccatcgcatacctcagggcagatcaattccgcacagacctct aactctgagctgcctccaaagccagctgcagtggtgagtgaggcctgtgatgctgatgat gctgataatgccagtaaactagctgcaatgctaaatacctgttcctttcagaaaccagaa caactacaacaacaaaaatcagtttttgagatatgcccatctcctgcagaaaataacatc cagggaaccacaaagctagcgtctggtgaagaattctgttcaggttccagcagcaatttg caagctcctggtggcagctctgaacggtatttaaaacaaaatgaaatgaatggtgcttac ttcaagcaaagctcagtgttcactaaggattccttttctgccactaccacaccaccacca ccatcacaattgcttctttctccccctcctcctcttccacaggttcctcagcttccttca gaaggaaaaagcactctgaatggtggagttttagaagaacaccaccactaccccaaccaa agtaacacaacacttttaagggaagtgaaaatagagggtaaacctgaggcaccaccttcc cagagtcctaatccatctacacatgtatgcagcccttctccgatgctttctgaaaggcct cagaataattgtgtgaacaggaatgacatacagactgcagggacaatgactgttccattg tgttctgagaaaacaagaccaatgtcagaacacctcaagcataacccaccaatttttggt agcagtggagagctacaggacaactgccagcagttgatgagaaacaaagagcaagagatt ctgaagggtcgagacaaggagcaaacacgagatcttgtgcccccaacacagcactatctg aaaccaggatggattgaattgaaggcccctcgttttcaccaagcggaatcccatctaaaa cgtaatgaggcatcactgccatcaattcttcagtatcaacccaatctctccaatcaaatg acctccaaacaatacactggaaattccaacatgcctggggggctcccaaggcaagcttac acccagaaaacaacacagctggagcacaagtcacaaatgtaccaagttgaaatgaatcaa gggcagtcccaaggtacagtggaccaacatctccagttccaaaaaccctcacaccaggtg cacttctccaaaacagaccatttaccaaaagctcatgtgcagtcactgtgtggcactaga tttcattttcaacaaagagcagattcccaaactgaaaaacttatgtccccagtgttgaaa cagcacttgaatcaacaggcttcagagactgagccattttcaaactcacaccttttgcaa cataagcctcataaacaggcagcacaaacacaaccatcccagagttcacatctccctcaa aaccagcaacagcagcaaaaattacaaataaagaataaagaggaaatactccagactttt cctcacccccaaagcaacaatgatcagcaaagagaaggatcattctttggccagactaaa gtggaagaatgttttcatggtgaaaatcagtattcaaaatcaagcgagttcgagactcat aatgtccaaatgggactggaggaagtacagaatataaatcgtagaaattccccttatagt cagaccatgaaatcaagtgcatgcaaaatacaggtttcttgttcaaacaatacacaccta gtttcagagaataaagaacagactacacatcctgaactttttgcaggaaacaagacccaa aacttgcatcacatgcaatattttccaaataatgtgatcccaaagcaagatcttcttcac aggtgctttcaagaacaggagcagaagtcacaacaagcttcagttctacagggatataaa aatagaaaccaagatatgtctggtcaacaagctgcgcaacttgctcagcaaaggtacttg atacataaccatgcaaatgtttttcctgtgcctgaccagggaggaagtcacactcagacc cctccccagaaggacactcaaaagcatgctgctctaaggtggcatctcttacagaagcaa gaacagcagcaaacacagcaaccccaaactgagtcttgccatagtcagatgcacaggcca attaaggtggaacctggatgcaagccacatgcctgtatgcacacagcaccaccagaaaac aaaacatggaaaaaggtaactaagcaagagaatccacctgcaagctgtgataatgtgcag caaaagagcatcattgagaccatggagcagcatctgaagcagtttcacgccaagtcgtta tttgaccataaggctcttactctcaaatcacagaagcaagtaaaagttgaaatgtcaggg ccagtcacagttttgactagacaaaccactgctgcagaacttgatagccacaccccagct ttagagcagcaaacaacttcttcagaaaagacaccaaccaaaagaacagctgcttctgtt ctcaataattttatagagtcaccttccaaattactagatactcctataaaaaatttattg gatacacctgtcaagactcaatatgatttcccatcttgcagatgtgtagagcaaattatt gaaaaagatgaaggtcctttttatacccatctaggagcaggtcctaatgtggcagctatt agagaaatcatggaagaaaggtttggacagaagggtaaagctattaggattgaaagagtc atctatactggtaaagaaggcaaaagttctcagggatgtcctattgctaagtgggtggtt cgcagaagcagcagtgaagagaagctactgtgtttggtgcgggagcgagctggccacacc tgtgaggctgcagtgattgtgattctcatcctggtgtgggaaggaatcccgctgtctctg gctgacaaactctactcggagcttaccgagacgctgaggaaatacggcacgctcaccaat cgccggtgtgccttgaatgaagagagaacttgcgcctgtcaggggctggatccagaaacc tgtggtgcctccttctcttttggttgttcatggagcatgtactacaatggatgtaagttt gccagaagcaagatcccaaggaagtttaagctgcttggggatgacccaaaagaggaagag aaactggagtctcatttgcaaaacctgtccactcttatggcaccaacatataagaaactt gcacctgatgcatataataatcagattgaatatgaacacagagcaccagagtgccgtctg ggtctgaaggaaggccgtccattctcaggggtcactgcatgtttggacttctgtgctcat gcccacagagacttgcacaacatgcagaatggcagcacattggtatgcactctcactaga gaagacaatcgagaatttggaggaaaacctgaggatgagcagcttcacgttctgccttta tacaaagtctctgacgtggatgagtttgggagtgtggaagctcaggaggagaaaaaacgg agtggtgccattcaggtactgagttcttttcggcgaaaagtcaggatgttagcagagcca gtcaagacttgccgacaaaggaaactagaagccaagaaagctgcagctgaaaagctttcc tccctggagaacagctcaaataaaaatgaaaaggaaaagtcagccccatcacgtacaaaa caaactgaaaacgcaagccaggctaaacagttggcagaacttttgcgactttcaggacca gtcatgcagcagtcccagcagccccagcctctacagaagcagccaccacagccccagcag cagcagagaccccagcagcagcagccacatcaccctcagacagagtctgtcaactcttat tctgcttctggatccaccaatccatacatgagacggcccaatccagttagtccttatcca aactcttcacacacttcagatatctatggaagcaccagccctatgaacttctattccacc tcatctcaagctgcaggttcatatttgaattcttctaatcccatgaacccttaccctggg cttttgaatcagaatacccaatatccatcatatcaatgcaatggaaacctatcagtggac aactgctccccatatctgggttcctattctccccagtctcagccgatggatctgtatagg tatccaagccaagaccctctgtctaagctcagtctaccacccatccatacactttaccag ccaaggtttggaaatagccagagttttacatctaaatacttaggttatggaaaccaaaat atgcagggagatggtttcagcagttgtaccattagaccaaatgtacatcatgtagggaaa ttgcctccttatcccactcatgagatggatggccacttcatgggagccacctctagatta ccacccaatctgagcaatccaaacatggactataaaaatggtgaacatcattcaccttct cacataatccataactacagtgcagctccgggcatgttcaacagctctcttcatgccctg catctccaaaacaaggagaatgacatgctttcccacacagctaatgggttatcaaagatg cttccagctcttaaccatgatagaactgcttgtgtccaaggaggcttacacaaattaagt gatgctaatggtcaggaaaagcagccattggcactagtccagggtgtggcttctggtgca gaggacaacgatgaggtctggtcagacagcgagcagagctttctggatcctgacattggg ggagtggccgtggctccaactcatgggtcaattctcattgagtgtgcaaagcgtgagctg catgccacaacccctttaaagaatcccaataggaatcaccccaccaggatctccctcgtc ttttaccagcataagagcatgaatgagccaaaacatggcttggctctttgggaagccaaa atggctgaaaaagcccgtgagaaagaggaagagtgtgaaaagtatggcccagactatgtg cctcagaaatcccatggcaaaaaagtgaaacgggagcctgctgagccacatgaaacttca gagcccacttacctgcgtttcatcaagtctcttgccgaaaggaccatgtccgtgaccaca gactccacagtaactacatctccatatgccttcactcgggtcacagggccttacaacaga tatatatga |
Protein Sequence |
>54790 : length: 2002 MEQDRTNHVEGNRLSPFLIPSPPICQTEPLATKLQNGSPLPERAHPEVNGDTKWHSFKSY YGIPCMKGSQNSRVSPDFTQESRGYSKCLQNGGIKRTVSEPSLSGLLQIKKLKQDQKANG ERRNFGVSQERNPGESSQPNVSDLSDKKESVSSVAQENAVKDFTSFSTHNCSGPENPELQ ILNEQEGKSANYHDKNIVLLKNKAVLMPNGATVSASSVEHTHGELLEKTLSQYYPDCVSI AVQKTTSHINAINSQATNELSCEITHPSHTSGQINSAQTSNSELPPKPAAVVSEACDADD ADNASKLAAMLNTCSFQKPEQLQQQKSVFEICPSPAENNIQGTTKLASGEEFCSGSSSNL QAPGGSSERYLKQNEMNGAYFKQSSVFTKDSFSATTTPPPPSQLLLSPPPPLPQVPQLPS EGKSTLNGGVLEEHHHYPNQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLSERP QNNCVNRNDIQTAGTMTVPLCSEKTRPMSEHLKHNPPIFGSSGELQDNCQQLMRNKEQEI LKGRDKEQTRDLVPPTQHYLKPGWIELKAPRFHQAESHLKRNEASLPSILQYQPNLSNQM TSKQYTGNSNMPGGLPRQAYTQKTTQLEHKSQMYQVEMNQGQSQGTVDQHLQFQKPSHQV HFSKTDHLPKAHVQSLCGTRFHFQQRADSQTEKLMSPVLKQHLNQQASETEPFSNSHLLQ HKPHKQAAQTQPSQSSHLPQNQQQQQKLQIKNKEEILQTFPHPQSNNDQQREGSFFGQTK VEECFHGENQYSKSSEFETHNVQMGLEEVQNINRRNSPYSQTMKSSACKIQVSCSNNTHL VSENKEQTTHPELFAGNKTQNLHHMQYFPNNVIPKQDLLHRCFQEQEQKSQQASVLQGYK NRNQDMSGQQAAQLAQQRYLIHNHANVFPVPDQGGSHTQTPPQKDTQKHAALRWHLLQKQ EQQQTQQPQTESCHSQMHRPIKVEPGCKPHACMHTAPPENKTWKKVTKQENPPASCDNVQ QKSIIETMEQHLKQFHAKSLFDHKALTLKSQKQVKVEMSGPVTVLTRQTTAAELDSHTPA LEQQTTSSEKTPTKRTAASVLNNFIESPSKLLDTPIKNLLDTPVKTQYDFPSCRCVEQII EKDEGPFYTHLGAGPNVAAIREIMEERFGQKGKAIRIERVIYTGKEGKSSQGCPIAKWVV RRSSSEEKLLCLVRERAGHTCEAAVIVILILVWEGIPLSLADKLYSELTETLRKYGTLTN RRCALNEERTCACQGLDPETCGASFSFGCSWSMYYNGCKFARSKIPRKFKLLGDDPKEEE KLESHLQNLSTLMAPTYKKLAPDAYNNQIEYEHRAPECRLGLKEGRPFSGVTACLDFCAH AHRDLHNMQNGSTLVCTLTREDNREFGGKPEDEQLHVLPLYKVSDVDEFGSVEAQEEKKR SGAIQVLSSFRRKVRMLAEPVKTCRQRKLEAKKAAAEKLSSLENSSNKNEKEKSAPSRTK QTENASQAKQLAELLRLSGPVMQQSQQPQPLQKQPPQPQQQQRPQQQQPHHPQTESVNSY SASGSTNPYMRRPNPVSPYPNSSHTSDIYGSTSPMNFYSTSSQAAGSYLNSSNPMNPYPG LLNQNTQYPSYQCNGNLSVDNCSPYLGSYSPQSQPMDLYRYPSQDPLSKLSLPPIHTLYQ PRFGNSQSFTSKYLGYGNQNMQGDGFSSCTIRPNVHHVGKLPPYPTHEMDGHFMGATSRL PPNLSNPNMDYKNGEHHSPSHIIHNYSAAPGMFNSSLHALHLQNKENDMLSHTANGLSKM LPALNHDRTACVQGGLHKLSDANGQEKQPLALVQGVASGAEDNDEVWSDSEQSFLDPDIG GVAVAPTHGSILIECAKRELHATTPLKNPNRNHPTRISLVFYQHKSMNEPKHGLALWEAK MAEKAREKEEECEKYGPDYVPQKSHGKKVKREPAEPHETSEPTYLRFIKSLAERTMSVTT DSTVTTSPYAFTRVTGPYNRYI |