| General information | Literature | Expression | Regulation | Variant | Interaction |
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Basic Information |
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|---|---|
Gene ID | 5927 |
Name | KDM5A |
Synonym | RBBP-2|RBBP2|RBP2;lysine (K)-specific demethylase 5A;KDM5A;lysine (K)-specific demethylase 5A |
Definition | Jumonji, AT rich interactive domain 1A (RBP2-like)|histone demethylase JARID1A|jumonji/ARID domain-containing protein 1A|lysine-specific demethylase 5A|retinoblastoma binding protein 2 |
Position | 12p11 |
Gene Type | protein-coding |
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TSG scores |
Description |
| TUSON ranking | 9293 |
TUSON P-value | 1 |
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External Links |
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Links to Entrez Gene | 5927 |
Links to all GeneRIF Items | 5927 |
Links to iHOP | 5927 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>5927 : length: 5073 atggcgggcgtggggccggggggctacgcggcggagttcgtgccaccgccagagtgcccc gtctttgagccgagttgggaggagttcacagatccgctcagctttatcggccgcatccgg cctttggcggagaaaaccggcatctgcaaaattcggccgcccaaggactggcagcctcca tttgcctgtgaagtaaaaagctttcgtttcactccaagagtccagcgcctgaatgaactt gaggcaatgaccagagtgagattggatttcttggatcaactagcaaaattttgggaactt caaggatctactctgaagatccctgtggtagagagaaaaatcctggatctgtatgctttg agcaagattgttgccagcaaaggaggttttgaaatggtcaccaaagagaagaaatggtct aaagtgggtagtcgcttgggatatctgccaggaaaaggaactgggtctcttttgaagtca cattatgaaagaattctctacccatatgagcttttccagtctggtgtgagccttatgggt gtgcagatgcctaatttagatcttaaagaaaaagtggagcctgaggttctcagcactgat acccaaacttccccagagccaggcacaaggatgaacattctgccgaagagaacaagacgt gtgaagactcagtcagaatctggagatgtgagtagaaacacggaactgaagaaacttcag atttttggggctgggcccaaggttgtgggcttggcaatgggaacaaaagataaagaagat gaggtcacccgaagacgaaaagttaccaacaggtcagacgcatttaacatgcaaatgaga caacggaaaggcactctctctgttaactttgttgatctctatgtttgtatgttttgtggt cggggaaacaatgaagataaattgcttttgtgtgatggatgtgatgacagctatcataca ttttgtctaattcctccactacctgatgtgcccaaaggagactggaggtgtcctaaatgt gtcgccgaggaatgtagcaaacctcgagaagcctttggatttgaacaagctgtacgagag tatacacttcagagctttggagagatggcagataattttaagtctgattattttaatatg ccagtccatatggttcccacagaactagtagaaaaggaattttggcggctggtaagcagc attgaagaagatgttattgtggaatatggagcagatatctcctcaaaagactttggaagt ggatttccggtgaaggatgggcggagaaagattctgccagaagaagaggaatatgcactt tctggttggaatttgaataacatgcctgtcctggaacagtctgttcttgcacatattaat gtggacatctctggtatgaaagtgccgtggctctatgtgggaatgtgcttctcttctttt tgctggcacattgaggatcactggagttattccatcaactacttgcactggggggagcca aagacatggtatggtgtgccatctcatgctgcagagcaactggaggaggtgatgagagag ctggcccccgagttatttgaatcccagcctgatcttctgcatcagttagttaccatcatg aaccccaacgtgctaatggagcatggtgtgcctgtgtacaggaccaatcagtgtgctggc gagtttgttgtgacatttcctcgtgcctatcactctggatttaaccagggctacaacttt gctgaagctgtgaacttctgtactgctgactggttgcccattggacgtcaatgtgtaaat cattaccgacgcctaaggcgccactgtgtcttttcacacgaggaactaattttcaagatg gcagcagatccagaatgcttagatgtggggctggctgccatggtctgcaaagaattgact ctcatgactgaagaagaaacacgattaagagagtctgttgtacagatgggtgtcctgatg tcagaagaagaagtgtttgaacttgttcctgatgatgagcggcagtgttcagcatgcaga accacatgttttctctctgctctcacatgttcctgtaatcctgagcggcttgtatgtctc taccatccaactgatctgtgcccctgccccatgcagaagaaatgtcttagatatcgctac ccattagaagacctcccttctctgctatatggtgtaaaagtcagggcacagtcctatgac acttgggtcagtcgtgttacagaagcattgtctgctaacttcaaccacaaaaaagatttg attgaattgcgagtaatgctggaagatgctgaggataggaaatacccagagaatgatctc tttcgaaaactcagggatgctgtaaaagaagctgagacctgtgcttctgtggctcagctg cttctgagcaaaaagcagaaacacagacagagcccagatagtgggaggactcggaccaaa ctgacagtggaagaattgaaggcctttgtccaacaactttttagtcttccgtgtgtcatc agccaagctcggcaagtaaagaatctgctagatgatgtggaagagtttcatgaacgtgct caggaggccatgatggatgaaaccccagattcttccaaactccagatgttgatagatatg ggctctagtctctatgtggaactccctgaattaccacgactgaagcaagagctacaacag gctcggtggttggacgaagtaagactgaccttatcagatccgcaacaagtcactttggat gtcatgaagaagctgatagactctggggtagggttggcaccccaccatgctgtggagaaa gcaatggctgaactacaggagctccttacagtctctgaacgatgggaagaaaaggctaag gtctgcctacaggcaagaccgaggcacagtgtggcaagtttagaaagcattgtgaatgaa gccaagaacattccagcctttctacccaatgtgttgtccttgaaagaagccttacaaaag gctcgagaatggaccgctaaagtggaagctattcagagtggcagcaattacgcttatttg gagcagcttgagagcttgtctgcgaaaggacgccctattcctgtgcgtcttgaagcactg ccgcaagtggaatcacaggtagcagcagcacgggcatggagagaacggactgggcggacg tttcttaagaagaattctagccatacattgttacaggtgctgagcccccggaccgacatt ggtgtatatgggagtggcaaaaataggaggaaaaaagtaaaagaactaatagaaaaagaa aaagaaaaggatctggacctggagcctctgagtgatctggaggaaggattggaggaaacc agagatacagccatggtggtggcagttttcaaagaacgggagcaaaaagagattgaagcc atgcattctctcagagcagccaacctagccaagatgacaatggtggaccgcatagaagaa gtaaaattttgcatttgccgcaagacagccagtgggtttatgctacagtgtgagctctgc aaagactggttccataacagctgtgttcctcttcctaaatcaagttcccaaaaaaaagga tccagctggcaagctaaagaagtaaaattcctttgccctctttgtatgcggtctcgaagg cccaggctagagactattctgtcactcctggtatcccttcagaagttgcccgtacggttg cctgaaggagaggccctgcagtgtttgacagaacgtgctatgagttggcaagatagagcg cggcaggctctagccacagatgaactatcctctgccctggccaaactatctgtgttgagc cagcgtatggtggaacaggcggctcgagaaaaaactgaaaagatcatcagtgcagaactc caaaaagcagctgccaatccagacttacagggacacttacctagtttccagcagtctgct tttaaccgggtggtgagcagtgtgtcatcttctcctcgacaaacaatggactatgatgat gaagaaacagactctgatgaagacattcgagagacatatggctacgacatgaaggacaca gccagtgtgaagtcctctagtagtcttgaacccaatcttttttgtgatgaagagattccc atcaaatccgaggaggtggtgacccacatgtggacagcaccttcattttgtgcagagcat gcttattcttctgcttctaagagttgttctcaaggttctagcaccccaaggaaacaacct cggaagagccctttggtgccccgaagtttggaacctccagtgctggagttgtcacctgga gctaaggcacaactggaagaacttatgatggttggagatctcctggaagtatctctggac gagactcaacacatatggcggattttgcaggccacacacccaccctctgaagacagattc ttgcatatcatggaggatgacagcatggaagagaaaccactaaaagtgaaaggaaaggac tcttcagagaagaaacggaaacggaagctagaaaaggtagagcaactttttggagaagga aaacagaagtccaaggagttaaagaaaatggacaaacctagaaagaagaaattaaaatta ggtgcagacaaatcaaaggagctgaataaactggccaagaaactagcaaaagaagaagag agaaagaaaaagaaggagaaggctgctgcagccaaagttgaacttgtgaaagagagcact gaaaagaaaagagagaaaaaggtgctggacatcccctcaaagtatgactggtcaggagca gaggagtctgatgatgagaatgctgtgtgcgcagcacagaactgccaaaggccctgcaag gacaaggtagactgggtacaatgtgatggtggctgtgatgagtggtttcatcaagtttgt gtgggtgtatctccagaaatggctgaaaatgaagattacatctgtataaactgtgcaaag aagcaggggccagttagcccaggtccagcaccacctccttccttcataatgagctacaaa ctaccaatggaggatcttaaagagaccagttag |
Protein Sequence |
>5927 : length: 1690 MAGVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL SKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG VQMPNLDLKEKVEPEVLSTDTQTSPEPGTRMNILPKRTRRVKTQSESGDVSRNTELKKLQ IFGAGPKVVGLAMGTKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG RGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECSKPREAFGFEQAVRE YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS GFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLM SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRY PLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYPENDL FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVI SQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ ARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK VCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGSNYAYL EQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI GVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEA MHSLRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKG SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPSFQQSA FNRVVSSVSSSPRQTMDYDDEETDSDEDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIP IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKVKGKD SSEKKRKRKLEKVEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKELNKLAKKLAKEEE RKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPVSPGPAPPPSFIMSYK LPMEDLKETS |