| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
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|---|---|
Gene ID | 8289 |
Name | ARID1A |
Synonym | B120|BAF250|BAF250a|BM029|C1orf4|ELD|MRD14|OSA1|P270|SMARCF1|hELD|hOSA1;AT rich interactive domain 1A (SWI-like);ARID1A;AT rich interactive domain 1A (SWI-like) |
Definition | ARID domain-containing protein 1A|AT-rich interactive domain-containing protein 1A|BRG1-associated factor 250a|OSA1 nuclear protein|SWI-like protein|SWI/SNF complex protein p270|SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin su |
Position | 1p35.3 |
Gene Type | protein-coding |
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TSG scores |
Description |
| TUSON ranking | 4 |
TUSON P-value | 6.49E-88 |
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Pathways and Diseases |
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Pathway | chromatin remodeling by hswi/snf atp-dependent complexes;PID BioCarta;100141 |
Pathway | the information processing pathway at the ifn beta enhancer;PID BioCarta;100079 |
Pathway | Wnt signaling pathway;PANTHER;P00057 |
Pathway | control of gene expression by vitamin d receptor;PID BioCarta;100007 |
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External Links |
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Links to Entrez Gene | 8289 |
Links to all GeneRIF Items | 8289 |
Links to iHOP | 8289 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>8289 : length: 6858 atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat gggggtggcggcggcggcggagccggcagcggcggcgggcccggcgcggagccggacctg aagaactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccg cccggcggcggcggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcg gccgccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgcc gtcgccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggc ctggcagcgctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcag aactctcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc gcctaccccccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggc tccggcgcggcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcc tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctcc gcggccggcgggggaactccccagcccaccgccacccccaccctcaaccaactgctcacg tcgcccagctcggcccggggctaccagggctaccccgggggcgactacagtggcgggccc caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgttggggggctgcg gcggcggcagctgcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcg cccatgagccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagcca tccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaaccca tactcgcagcaacagggacctccgtcaggaccgcagcaaggacatgggtacccagggcag ccatacgggtcccagaccccgcagcggtacccgatgaccatgcagggccgggcgcagagt gccatgggcggcctctcttatacacagcagattcctccttatggacaacaaggccccagc gggtatggtcaacagggccagactccatattacaaccagcaaagtcctcaccctcagcag cagcagccaccctactcccagcaaccaccgtcccagacccctcatgcccaaccttcgtat cagcagcagccacagtctcaaccaccacagctccagtcctctcagcctccatactcccag cagccatcccagcctccacatcagcagtccccggctccatacccctcccagcagtcgacg acacagcagcacccccagagccagcccccctactcacagccacaggctcagtctccttac cagcagcagcaacctcagcagccagcaccctcgacgctctcccagcaggctgcgtatcct cagccccagtctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccg caggagctatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctcc agtaagggagggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcct gatctatctggttcaatagatgacctccccatggggacagaaggagctctgagtcctgga gtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcct ttctctcctcatacctcccctcacctgcctggcatccgaggcccttccccgtcccctgtt ggctctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgcca ggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttcc atgaaccaatcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccc cagtacagttccccccagcccggctcagccttatctccgcgtcagccttccggaggacag atacacacaggcatgggctcctaccagcagaactccatggggagctatggtccccagggg ggtcagtatggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaat gccaactaccccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcaa atgcatggacagcctggcatcccaccttatggcacactccctccagggaggatgagtcac gcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggttggg tcagggatgtgtcccccaccagggggcatgaaccggaaaacccaagaaactgctgtcgcc atgcatgttgctgccaactctatccaaaacaggccgccaggctaccccaatatgaatcaa gggggcatgatgggaactggacctccttatggacaagggattaatagtatggctggcatg atcaaccctcagggacccccatattccatgggtggaaccatggccaacaattctgcaggg atggcagccagcccagagatgatgggccttggggatgtaaagttaactccagccaccaaa atgaacaacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagttct tctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagagg aagatgtgggtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaat ctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggag attggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctc aatgtgggcacatcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctc tatgcctttgaatgcaagattgaacggggagaagaccctcccccagacatctttgcagct gctgattccaagaagtcccagcccaagatccagcctccctctcctgcgggatcaggatct atgcaggggccccagactccccagtcaaccagcagttccatggcagaaggaggagactta aagccaccaactccagcatccacaccacacagtcagatccccccattgccaggcatgagc aggagcaattcagttgggatccaggatgcctttaatgatggaagtgactccacattccag aagcggaattccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatg atggggcgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaagctcca gggagtgatcccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctac agtcgtgctgccggccctgggctaggaaatgtggcgatgggaccacgacagcactatccc tatggaggtccttatgacagagtgaggacggagcctggaatagggcctgagggaaacatg agcactggggccccacagccgaatctcatgccttccaacccagactcggggatgtattct cctagccgctaccccccgcagcagcagcagcagcagcagcaacgacatgattcctatggc aatcagttctccacccaaggcaccccttctggcagccccttccccagccagcagactaca atgtatcaacagcaacagcagaattacaagcggccaatggatggcacatatggccctcct gccaagcggcacgaaggggagatgtacagcgtgccatacagcactgggcaggggcagcct cagcagcagcagttgcccccagcccagccccagcctgccagccagcaacaagctgcccag ccttcccctcagcaagatgtatacaaccagtatggcaatgcctatcctgccactgccaca gctgctactgagcgccgaccagcaggcggcccccagaaccaatttccattccagtttggc cgagaccgtgtctctgcaccccctggcaccaatgcccagcaaaacatgccaccacaaatg atgggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcagggg cgtaatgacatgacctataattatgccaacaggcagagcacgggctctgccccccagggc cccgcctatcatggcgtgaaccgaacagatgaaatgctgcacacagatcagagggccaac cacgaaggctcgtggccttcccatggcacacgccagcccccatatggtccctctgcccct gtgccccccatgacaaggccccctccatctaactaccagcccccaccaagcatgcagaat cacattcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacctct cctagcaagtctccattcctgcactctgggatgaaaatgcagaaggcaggtcccccagta cctgcctcgcacatagcacctgcccctgtgcagccccccatgattcggcgggatatcacc ttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctcaca atgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctggtctc ctggcagagagcacatgggcattagataccatcaacatcctgctgtatgatgacaacagc atcatgaccttcaacctcagtcagctcccagggttgctagagctccttgtagaatatttc cgacgatgcctgattgagatctttggcattttaaaggagtatgaggtgggtgacccagga cagagaacgctactggatcctgggaggttcagcaaggtgtctagtccagctcccatggag ggtggggaagaagaagaagaacttctaggtcctaaactagaagaggaagaagaagaggaa gtagttgaaaatgatgaggagatagccttttcaggcaaggacaagccagcttcagagaat agtgaggagaagctgatcagtaagtttgacaagcttccagtaaagatcgtacagaagaat gatccatttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagtggc ctgctgcactggcggattggtgggggggacaccactgagcatatccagacccacttcgag agcaagacagagctgctgccttcccggcctcacgcaccctgcccaccagcccctcggaag catgtgacaacagcagagggtacaccagggacaacagaccaggaggggcccccacctgat ggacctccagaaaaacggatcacagccactatggatgacatgttgtctactcggtctagc accttgaccgaggatggagctaagagttcagaggccatcaaggagagcagcaagtttcca tttggcattagcccagcacagagccaccggaacatcaagatcctagaggacgaaccccac agtaaggatgagaccccactgtgtacccttctggactggcaggattctcttgccaagcgc tgcgtctgtgtgtccaataccattcgaagcctgtcatttgtgccaggcaatgactttgag atgtccaaacacccagggctgctgctcatcctgggcaagctgatcctgctgcaccacaag cacccagaacggaagcaggcaccactaacttatgaaaaggaggaggaacaggaccaaggg gtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacacc ttggttacactcgccaacatctcggggcagttggacctatctccataccccgagagcatt tgcctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaagcccag gaccccttttccaccctgggccccaatgccgtcctttccccgcagagactggtcttggaa accctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacacccccc ttcagccgcctggagaagttgtatagcactatggtgcgcttcctcagtgaccgaaagaac ccggtgtgccgggagatggctgtggtactgctggccaacctggctcagggggacagcctg gcagctcgtgccattgcagtgcagaagggcagtatcggcaacctcctgggcttcctagag gacagccttgccgccacacagttccagcagagccaggccagcctcctccacatgcagaac ccaccctttgagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgcttgcc ttggccaaggtggacgagaaccactcagagtttactctgtacgaatcacggctgttggac atctcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgttt ttgattggccagtcatga |
Protein Sequence |
>8289 : length: 2285 MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG PAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEP PGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG LAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPG SGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT SPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHA PMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQ PYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQ QQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPP QELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG VSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVP GNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQ IHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQ MHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVA MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAG MAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPER KMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNL NVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGS MQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQ KRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPY SRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYS PSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPP AKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAT AATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQG RNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAP VPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV PASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGL LAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPG QRTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASEN SEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFE SKTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSS TLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKR CVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQG VSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQ DPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKN PVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQN PPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF LIGQS |