Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

1528

Name

CYB5A

Synonymous

cytochrome b5 type A (microsomal);CYB5A;cytochrome b5 type A (microsomal)

Definition

cytochrome b5|type 1 cyt-b5

Position

18q23

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

Top

We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

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The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

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Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.00.

The copy number variations for various cancers

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The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.288G>A; p.P96P; 18:74260915-74260915

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - coding silent

c.7G>C; p.E3Q; 18:74291869-74291869

oesophaguscarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.31T>C; p.Y11H; 18:74291845-74291845

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.375G>C; p.L125F; 18:74253614-74253614

urinary_tract; bladdercarcinomaSubstitution - Missense

c.375G>C; p.L125F; 18:74253614-74253614

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.138T>C; p.G46G; 18:74263469-74263469

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - coding silent

c.339G>A; p.W113*; 18:74253650-74253650

skin; scalpcarcinoma; squamous_cell_carcinomaSubstitution - Nonsense

c.366C>T; p.A122A; 18:74253623-74253623

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.172G>A; p.D58N; 18:74263435-74263435

breastcarcinomaSubstitution - Missense

c.22G>A; p.A8T; 18:74291854-74291854

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.369C>T; p.V123V; 18:74253620-74253620

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - coding silent

c.48G>T; p.E16D; 18:74291828-74291828

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.256C>T; p.P86S; 18:74263351-74263351

skinmalignant_melanomaSubstitution - Missense

c.14C>T; p.S5L; 18:74291862-74291862

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; follicular_lymphomaSubstitution - Missense

c.232A>C; p.T78P; 18:74263375-74263375

breastcarcinomaSubstitution - Missense

c.117A>T; p.K39N; 18:74291759-74291759

livercarcinomaSubstitution - Missense

c.245_246GG>TT; p.G82>?; 18:74263361-74263362

lungcarcinoma; adenocarcinomaComplex

c.45G>A; p.E15E; 18:74291831-74291831

breastcarcinomaSubstitution - coding silent

c.181G>C; p.E61Q; 18:74263426-74263426

thyroidcarcinomaSubstitution - Missense

c.383G>A; p.R128H; 18:74253606-74253606

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.227C>T; p.S76F; 18:74263380-74263380

skinmalignant_melanomaSubstitution - Missense

c.382C>T; p.R128C; 18:74253607-74253607

skinmalignant_melanomaSubstitution - Missense

c.382C>T; p.R128C; 18:74253607-74253607

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.367G>C; p.V123L; 18:74253622-74253622

stomachcarcinoma; adenocarcinomaSubstitution - Missense


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