Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

23512

Name

SUZ12

Synonymous

SUZ12 polycomb repressive complex 2 subunit;SUZ12;SUZ12 polycomb repressive complex 2 subunit

Definition

chET 9 protein|chromatin precipitated E2F target 9 protein|joined to JAZF1 protein|polycomb protein SUZ12|suppressor of zeste 12 homolog|suppressor of zeste 12 protein homolog

Position

17q11.2

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

Top

We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

Top

The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

Top

Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.25.

The copy number variations for various cancers

Top

The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.824-1G>T; p.?; 17:31976520-31976520

lungcarcinoma; squamous_cell_carcinomaUnknown

c.1078C>T; p.R360C; 17:31988374-31988374

skin; neckmalignant_melanomaSubstitution - Missense

c.1078C>T; p.R360C; 17:31988374-31988374

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1295T>G; p.F432C; 17:31993866-31993866

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1585C>G; p.L529V; 17:31994711-31994711

breastcarcinomaSubstitution - Missense

c.868G>A; p.D290N; 17:31976565-31976565

skinmalignant_melanomaSubstitution - Missense

c.1950G>T; p.K650N; 17:31998733-31998733

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.667A>T; p.K223*; 17:31975557-31975557

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Nonsense

c.2043C>T; p.L681L; 17:31998826-31998826

skinmalignant_melanomaSubstitution - coding silent

c.1552G>A; p.G518R; 17:31994678-31994678

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.546T>C; p.V182V; 17:31973186-31973186

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.1047T>A; p.F349L; 17:31988343-31988343

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.55G>A; p.G19R; 17:31937301-31937301

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1742T>A; p.V581E; 17:31995710-31995710

ovarycarcinoma; serous_carcinomaSubstitution - Missense

c.681C>T; p.F227F; 17:31975571-31975571

skinmalignant_melanomaSubstitution - coding silent

c.1129C>T; p.L377F; 17:31988425-31988425

urinary_tract; bladdercarcinomaSubstitution - Missense

c.856C>T; p.R286*; 17:31976553-31976553

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_T_cell_leukaemiaSubstitution - Nonsense

c.856C>T; p.R286*; 17:31976553-31976553

central_nervous_system; braingliomaSubstitution - Nonsense

c.856C>T; p.R286*; 17:31976553-31976553

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Nonsense

c.974G>A; p.C325Y; 17:31983055-31983055

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.2013A>G; p.I671M; 17:31998796-31998796

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1723C>T; p.R575C; 17:31995691-31995691

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.302G>A; p.R101Q; 17:31940313-31940313

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.992G>A; p.R331K; 17:31983073-31983073

urinary_tract; bladdercarcinoma; transitional_cell_carcinomaSubstitution - Missense

c.992G>A; p.R331K; 17:31983073-31983073

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1794+1G>C; p.?; 17:31995763-31995763

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaUnknown

c.1794+1G>C; p.?; 17:31995763-31995763

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaUnknown

c.1825G>A; p.G609R; 17:31996828-31996828

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.343_346delCTTA; p.Y117fs*24; 17:31940443-31940446

breastcarcinomaDeletion - Frameshift

c.343_346delCTTA; p.Y117fs*24; 17:31940443-31940446

endometriumcarcinoma; endometrioid_carcinomaDeletion - Frameshift

c.1147G>A; p.E383K; 17:31988443-31988443

breastcarcinomaSubstitution - Missense

c.504T>C; p.N168N; 17:31966195-31966195

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.161_163delCCT; p.S59delS; 17:31937407-31937409

skinmalignant_melanomaDeletion - In frame

c.212T>C; p.V71A; 17:31937458-31937458

stomachcarcinoma; intestinal_adenocarcinomaSubstitution - Missense

c.184G>C; p.A62P; 17:31937430-31937430

ovaryother; neoplasmSubstitution - Missense

c.1801G>C; p.E601Q; 17:31996804-31996804

urinary_tract; bladdercarcinomaSubstitution - Missense

c.2166G>A; p.L722L; 17:31998949-31998949

skinmalignant_melanomaSubstitution - coding silent

c.338G>A; p.R113K; 17:31940438-31940438

breastcarcinomaSubstitution - Missense

c.1284A>G; p.I428M; 17:31993324-31993324

skin; extremitymalignant_melanomaSubstitution - Missense

c.1377delA; p.K459fs*29; 17:31993948-31993948

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; hairy_cell_leukaemiaDeletion - Frameshift

c.1062G>A; p.T354T; 17:31988358-31988358

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.698C>T; p.S233F; 17:31975588-31975588

skinmalignant_melanomaSubstitution - Missense

c.1430A>C; p.N477T; 17:31994001-31994001

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.955A>C; p.M319L; 17:31983036-31983036

breastcarcinomaSubstitution - Missense

c.1648G>A; p.E550K; 17:31995616-31995616

upper_aerodigestive_tract; mouthcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.995C>T; p.A332V; 17:31983076-31983076

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.994G>A; p.A332T; 17:31983075-31983075

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.488G>A; p.G163D; 17:31966179-31966179

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.488G>A; p.G163D; 17:31966179-31966179

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.2087_2088insA; p.A697fs*7; 17:31998870-31998871

large_intestine; coloncarcinoma; adenocarcinomaInsertion - Frameshift

c.488G>A; p.G163D; 17:31966179-31966179

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.301C>T; p.R101*; 17:31940312-31940312

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Nonsense

c.1875-1G>T; p.?; 17:31998657-31998657

skinmalignant_melanomaUnknown

c.1038C>T; p.F346F; 17:31988334-31988334

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.767G>A; p.R256H; 17:31975657-31975657

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.2044C>T; p.R682C; 17:31998827-31998827

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.2073G>A; p.G691G; 17:31998856-31998856

breastcarcinomaSubstitution - coding silent

c.308G>A; p.R103Q; 17:31940319-31940319

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.308G>A; p.R103Q; 17:31940319-31940319

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.1522C>T; p.R508C; 17:31994648-31994648

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.1013T>A; p.L338H; 17:31983094-31983094

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.426G>T; p.E142D; 17:31947656-31947656

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1316G>T; p.R439M; 17:31993887-31993887

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1146_1147delAG; p.L385fs*10; 17:31988442-31988443

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_T_cell_leukaemiaDeletion - Frameshift

c.820A>C; p.I274L; 17:31975710-31975710

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_T_cell_leukaemiaSubstitution - Missense

c.825T>A; p.D275E; 17:31976522-31976522

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1764T>G; p.D588E; 17:31995732-31995732

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.372_375delAACA; p.N126fs*15; 17:31940472-31940475

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; myelofibrosisDeletion - Frameshift

c.1375A>G; p.K459E; 17:31993946-31993946

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.2173G>T; p.D725Y; 17:31998956-31998956

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.795G>A; p.M265I; 17:31975685-31975685

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1926T>G; p.N642K; 17:31998709-31998709

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.920G>A; p.R307H; 17:31983001-31983001

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.285G>C; p.Q95H; 17:31940296-31940296

breastcarcinomaSubstitution - Missense

c.1702A>G; p.S568G; 17:31995670-31995670

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.1702A>G; p.S568G; 17:31995670-31995670

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.1702A>G; p.S568G; 17:31995670-31995670

large_intestine; coloncarcinomaSubstitution - Missense

c.1702A>G; p.S568G; 17:31995670-31995670

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.1814A>T; p.D605V; 17:31996817-31996817

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_B_cell_leukaemiaSubstitution - Missense

c.1090G>T; p.E364*; 17:31988386-31988386

lungcarcinoma; squamous_cell_carcinomaSubstitution - Nonsense

c.1039G>A; p.E347K; 17:31988335-31988335

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.1692_1704del13; p.Y565fs*13; 17:31995660-31995672

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_T_cell_leukaemiaDeletion - Frameshift

c.646A>C; p.N216H; 17:31975536-31975536

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1079G>A; p.R360H; 17:31988375-31988375

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1811C>G; p.S604C; 17:31996814-31996814

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1268G>A; p.R423Q; 17:31993308-31993308

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1373G>A; p.R458H; 17:31993944-31993944

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1183A>G; p.K395E; 17:31988479-31988479

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.432G>C; p.M144I; 17:31947662-31947662

breastcarcinomaSubstitution - Missense

c.1202-3C>A; p.?; 17:31993239-31993239

skin; head_neckcarcinoma; squamous_cell_carcinomaUnknown

c.1323A>C; p.Q441H; 17:31993894-31993894

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1738G>T; p.E580*; 17:31995706-31995706

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_T_cell_leukaemiaSubstitution - Nonsense

c.1886A>T; p.D629V; 17:31998669-31998669

upper_aerodigestive_tract; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1261G>A; p.E421K; 17:31993301-31993301

central_nervous_system; brainglioma; astrocytoma_Grade_IVSubstitution - Missense

c.1993G>T; p.D665Y; 17:31998776-31998776

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.480G>A; p.T160T; 17:31966171-31966171

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.480G>A; p.T160T; 17:31966171-31966171

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.921_922delCT; p.L308fs*8; 17:31983002-31983003

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaDeletion - Frameshift

c.619C>T; p.P207S; 17:31975509-31975509

skinmalignant_melanomaSubstitution - Missense

c.1993G>A; p.D665N; 17:31998776-31998776

oesophagus; middle_thirdcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.857G>A; p.R286Q; 17:31976554-31976554

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.857G>A; p.R286Q; 17:31976554-31976554

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.1105_1106insA; p.S369fs*12; 17:31988401-31988402

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_T_cell_leukaemiaInsertion - Frameshift

c.2148_2154delCTCAAAA; p.N716fs*>22; 17:31998931-31998937

central_nervous_system; braingliomaDeletion - Frameshift

c.2148_2154delCTCAAAA; p.N716fs*>22; 17:31998931-31998937

lungcarcinoma; large_cell_carcinomaDeletion - Frameshift

c.1105_1106insA; p.S369fs*12; 17:31988401-31988402

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_T_cell_leukaemiaInsertion - Frameshift

c.1620G>T; p.M540I; 17:31995588-31995588

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.2098G>T; p.E700*; 17:31998881-31998881

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Nonsense

c.153T>G; p.S51R; 17:31937399-31937399

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.283C>A; p.Q95K; 17:31940294-31940294

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; T_cell_large_granular_lymphocytic_leukaemiaSubstitution - Missense

c.283C>A; p.Q95K; 17:31940294-31940294

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; T_cell_large_granular_lymphocytic_leukaemiaSubstitution - Missense

c.427A>G; p.K143E; 17:31947657-31947657

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1412A>G; p.H471R; 17:31993983-31993983

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.2192C>G; p.S731*; 17:31998975-31998975

breastcarcinomaSubstitution - Nonsense


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