General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information |
|
---|---|
Gene ID | 5909 |
Name | RAP1GAP |
Synonymous | RAP1 GTPase activating protein;RAP1GAP;RAP1 GTPase activating protein |
Definition | rap1 GTPase-activating protein 1 |
Position | 1p36.1-p35 |
Gene Type | protein-coding |
Mutation summary: | Mutations in domains Mutational pattern in 17 major cancer types LoF vs missense mutations All the copy number variations from COSMIC database V72 All the mutations from COSMIC database V72 |
Mutation summary in protein domains | Top |
The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers | Top |
Loss of Function mutations compare to missense mutations | Top |
The ratio of the loss-of-function mutations over missense mutations is 0.08. |
The copy number variations for various cancers | Top |
The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract |
COSMIC somatic mutation [Top] | |||
Mutation (CDS; AA; Chr) |
Site |
Histology |
Mutation Type |
---|---|---|---|
c.876C>T; p.I292I; 1:21610243-21610243 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - coding silent |
c.876C>T; p.I292I; 1:21610243-21610243 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - coding silent |
c.1051G>T; p.D351Y; 1:21609595-21609595 |
liver | carcinoma; hepatocellular_carcinoma | Substitution - Missense |
c.459T>G; p.V153V; 1:21613643-21613643 |
skin | malignant_melanoma | Substitution - coding silent |
c.1498G>A; p.A500T; 1:21602844-21602844 |
stomach | carcinoma; adenocarcinoma | Substitution - Missense |
c.1458G>A; p.T486T; 1:21602884-21602884 |
skin | malignant_melanoma | Substitution - coding silent |
c.1458G>A; p.T486T; 1:21602884-21602884 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - coding silent |
c.1498G>A; p.A500T; 1:21602844-21602844 |
stomach | carcinoma; adenocarcinoma | Substitution - Missense |
c.450C>T; p.F150F; 1:21613652-21613652 |
skin | malignant_melanoma | Substitution - coding silent |
c.450C>T; p.F150F; 1:21613652-21613652 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - coding silent |
c.865G>A; p.G289R; 1:21610254-21610254 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Missense |
c.1683G>A; p.A561A; 1:21599587-21599587 |
stomach | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1722C>A; p.S574R; 1:21599548-21599548 |
lung | carcinoma; small_cell_carcinoma | Substitution - Missense |
c.864C>T; p.I288I; 1:21610255-21610255 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - coding silent |
c.1072-4C>A; p.?; 1:21608940-21608940 |
haematopoietic_and_lymphoid_tissue | haematopoietic_neoplasm; acute_myeloid_leukaemia | Unknown |
c.1605G>A; p.E535E; 1:21601731-21601731 |
lung; right_upper_lobe | carcinoma; adenocarcinoma | Substitution - coding silent |
c.900G>T; p.E300D; 1:21610219-21610219 |
pancreas | carcinoma | Substitution - Missense |
c.1256_1268del13; p.E419fs*25; 1:21608241-21608253 |
lung | carcinoma; adenocarcinoma | Deletion - Frameshift |
c.1817C>G; p.S606C; 1:21598462-21598462 |
thyroid | other; neoplasm | Substitution - Missense |
c.1595C>A; p.P532H; 1:21601741-21601741 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.1703C>T; p.S568F; 1:21599567-21599567 |
skin | malignant_melanoma | Substitution - Missense |
c.924G>A; p.M308I; 1:21610195-21610195 |
kidney | carcinoma; clear_cell_renal_cell_carcinoma | Substitution - Missense |
c.1553C>T; p.A518V; 1:21601783-21601783 |
thyroid | carcinoma | Substitution - Missense |
c.1487G>C; p.R496P; 1:21602855-21602855 |
lung | carcinoma; adenocarcinoma | Substitution - Missense |
c.87A>C; p.P29P; 1:21617952-21617952 |
ovary | carcinoma; serous_carcinoma | Substitution - coding silent |
c.911T>C; p.F304S; 1:21610208-21610208 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Missense |
c.799C>T; p.H267Y; 1:21611496-21611496 |
upper_aerodigestive_tract; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - Missense |
c.138C>T; p.I46I; 1:21617459-21617459 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - coding silent |
c.1162C>T; p.R388W; 1:21608347-21608347 |
urinary_tract; bladder | carcinoma | Substitution - Missense |
c.1576G>A; p.G526R; 1:21601760-21601760 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.344C>T; p.S115L; 1:21614037-21614037 |
skin | malignant_melanoma | Substitution - Missense |
c.1272C>G; p.G424G; 1:21608237-21608237 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1605G>T; p.E535D; 1:21601731-21601731 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Missense |
c.845T>C; p.L282S; 1:21610274-21610274 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Missense |
c.732C>T; p.D244D; 1:21611563-21611563 |
stomach | carcinoma; adenocarcinoma | Substitution - coding silent |
c.660C>T; p.F220F; 1:21611769-21611769 |
large_intestine; caecum | carcinoma; adenocarcinoma | Substitution - coding silent |
c.660C>T; p.F220F; 1:21611769-21611769 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - coding silent |
c.231C>A; p.T77T; 1:21617366-21617366 |
ovary | carcinoma; serous_carcinoma | Substitution - coding silent |
c.660C>T; p.F220F; 1:21611769-21611769 |
liver | carcinoma | Substitution - coding silent |
c.382C>T; p.R128W; 1:21613999-21613999 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.1862G>A; p.S621N; 1:21598417-21598417 |
pancreas | carcinoma | Substitution - Missense |
c.1614C>T; p.S538S; 1:21601722-21601722 |
skin | malignant_melanoma | Substitution - coding silent |
c.354C>A; p.Y118*; 1:21614027-21614027 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Nonsense |
c.912C>T; p.F304F; 1:21610207-21610207 |
breast | carcinoma | Substitution - coding silent |
c.727C>A; p.L243M; 1:21611568-21611568 |
stomach | carcinoma; adenocarcinoma | Substitution - Missense |
c.618C>A; p.S206S; 1:21611811-21611811 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1965G>A; p.E655E; 1:21597979-21597979 |
breast | carcinoma | Substitution - coding silent |
c.474+1G>T; p.?; 1:21613627-21613627 |
urinary_tract; bladder | carcinoma | Unknown |
c.1391C>T; p.A464V; 1:21606103-21606103 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.792C>T; p.I264I; 1:21611503-21611503 |
skin; trunk | malignant_melanoma; nodular | Substitution - coding silent |
c.1391C>T; p.A464V; 1:21606103-21606103 |
stomach | carcinoma; adenocarcinoma | Substitution - Missense |
c.320C>T; p.A107V; 1:21614061-21614061 |
skin | malignant_melanoma | Substitution - Missense |
c.1486C>T; p.R496C; 1:21602856-21602856 |
large_intestine; caecum | carcinoma; adenocarcinoma | Substitution - Missense |
c.717_718CC>TT; p.R240*; 1:21611577-21611578 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - Nonsense |
c.1221C>A; p.S407S; 1:21608288-21608288 |
lung | carcinoma; squamous_cell_carcinoma | Substitution - coding silent |
c.364G>A; p.G122R; 1:21614017-21614017 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.1091T>G; p.F364C; 1:21608917-21608917 |
liver | carcinoma | Substitution - Missense |
c.1091T>G; p.F364C; 1:21608917-21608917 |
liver | carcinoma | Substitution - Missense |
c.1091T>G; p.F364C; 1:21608917-21608917 |
large_intestine; rectum | carcinoma; adenocarcinoma | Substitution - Missense |
c.1901C>A; p.P634Q; 1:21598043-21598043 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.52_53CC>TT; p.P18L; 1:21619038-21619039 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - Missense |
c.1179C>T; p.L393L; 1:21608330-21608330 |
skin | malignant_melanoma | Substitution - coding silent |
c.888C>G; p.V296V; 1:21610231-21610231 |
kidney | carcinoma; papillary_renal_cell_carcinoma | Substitution - coding silent |
c.1187C>T; p.T396M; 1:21608322-21608322 |
central_nervous_system; brain | primitive_neuroectodermal_tumour-medulloblastoma | Substitution - Missense |
c.1759G>A; p.G587R; 1:21599511-21599511 |
stomach | carcinoma; adenocarcinoma | Substitution - Missense |
c.834C>T; p.D278D; 1:21611461-21611461 |
stomach | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1476G>A; p.P492P; 1:21602866-21602866 |
stomach | carcinoma; adenocarcinoma | Substitution - coding silent |
c.631T>G; p.F211V; 1:21611798-21611798 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Missense |
c.1676C>T; p.A559V; 1:21599594-21599594 |
lung | carcinoma; small_cell_carcinoma | Substitution - Missense |
c.1202T>C; p.L401P; 1:21608307-21608307 |
stomach | carcinoma; adenocarcinoma | Substitution - Missense |
c.1072G>T; p.G358W; 1:21608936-21608936 |
lung | carcinoma; squamous_cell_carcinoma | Substitution - Missense |
c.1271G>A; p.G424D; 1:21608238-21608238 |
biliary_tract; gallbladder | carcinoma; adenocarcinoma | Substitution - Missense |
c.1827T>C; p.Y609Y; 1:21598452-21598452 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1072-4C>T; p.?; 1:21608940-21608940 |
haematopoietic_and_lymphoid_tissue | haematopoietic_neoplasm; acute_myeloid_leukaemia | Unknown |
c.146C>T; p.P49L; 1:21617451-21617451 |
skin | malignant_melanoma | Substitution - Missense |
c.71A>T; p.E24V; 1:21617968-21617968 |
skin | malignant_melanoma | Substitution - Missense |
c.1281C>A; p.F427L; 1:21608228-21608228 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Missense |
c.1281C>A; p.F427L; 1:21608228-21608228 |
large_intestine; rectum | carcinoma; adenocarcinoma | Substitution - Missense |
c.184G>A; p.E62K; 1:21617413-21617413 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.678T>A; p.F226L; 1:21611751-21611751 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - Missense |
c.507C>A; p.F169L; 1:21613197-21613197 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - Missense |
c.1625C>T; p.S542F; 1:21601711-21601711 |
skin | malignant_melanoma | Substitution - Missense |
c.1732G>A; p.V578M; 1:21599538-21599538 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.1846A>G; p.S616G; 1:21598433-21598433 |
oesophagus; lower_third | carcinoma; adenocarcinoma | Substitution - Missense |
c.1667C>G; p.A556G; 1:21599603-21599603 |
prostate | carcinoma; adenocarcinoma | Substitution - Missense |
c.139C>T; p.L47L; 1:21617458-21617458 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - coding silent |
c.97G>A; p.V33M; 1:21617942-21617942 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.1731C>T; p.S577S; 1:21599539-21599539 |
breast | carcinoma | Substitution - coding silent |
c.724G>T; p.G242C; 1:21611571-21611571 |
liver | carcinoma | Substitution - Missense |
c.201C>T; p.P67P; 1:21617396-21617396 |
skin; head_neck | carcinoma; squamous_cell_carcinoma | Substitution - coding silent |
c.1469C>T; p.S490L; 1:21602873-21602873 |
stomach | carcinoma; adenocarcinoma | Substitution - Missense |
c.939C>T; p.F313F; 1:21610180-21610180 |
kidney | carcinoma; clear_cell_renal_cell_carcinoma | Substitution - coding silent |
c.1469C>T; p.S490L; 1:21602873-21602873 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.469G>A; p.A157T; 1:21613633-21613633 |
liver | carcinoma | Substitution - Missense |
c.1826A>G; p.Y609C; 1:21598453-21598453 |
breast | carcinoma; ductal_carcinoma | Substitution - Missense |
c.327C>T; p.L109L; 1:21614054-21614054 |
endometrium | carcinoma; endometrioid_carcinoma | Substitution - coding silent |
c.769T>C; p.C257R; 1:21611526-21611526 |
breast | carcinoma | Substitution - Missense |
c.769T>C; p.C257R; 1:21611526-21611526 |
breast | carcinoma; ductal_carcinoma | Substitution - Missense |
c.1626C>T; p.S542S; 1:21601710-21601710 |
skin | malignant_melanoma | Substitution - coding silent |
c.1563G>A; p.K521K; 1:21601773-21601773 |
large_intestine; caecum | carcinoma; adenocarcinoma | Substitution - coding silent |
c.270C>T; p.Y90Y; 1:21617327-21617327 |
thyroid | other; neoplasm | Substitution - coding silent |
c.1362C>T; p.T454T; 1:21606132-21606132 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1045delC; p.L349fs*18; 1:21609601-21609601 |
large_intestine; colon | carcinoma; adenocarcinoma | Deletion - Frameshift |
c.1562A>G; p.K521R; 1:21601774-21601774 |
skin | malignant_melanoma | Substitution - Missense |
c.818delC; p.P273fs*36; 1:21611477-21611477 |
lung | carcinoma; adenocarcinoma | Deletion - Frameshift |
c.1764G>A; p.E588E; 1:21599506-21599506 |
skin | malignant_melanoma | Substitution - coding silent |
c.980C>T; p.P327L; 1:21610139-21610139 |
ovary | carcinoma; serous_carcinoma | Substitution - Missense |
c.1575C>T; p.S525S; 1:21601761-21601761 |
breast | carcinoma | Substitution - coding silent |
c.348C>G; p.L116L; 1:21614033-21614033 |
large_intestine; rectum | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1050G>A; p.P350P; 1:21609596-21609596 |
pancreas | carcinoma | Substitution - coding silent |
c.1050G>A; p.P350P; 1:21609596-21609596 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1457C>T; p.T486M; 1:21602885-21602885 |
large_intestine; caecum | carcinoma; adenocarcinoma | Substitution - Missense |
c.1895C>A; p.P632H; 1:21598049-21598049 |
large_intestine; colon | carcinoma; adenocarcinoma | Substitution - Missense |
c.1064T>C; p.F355S; 1:21609582-21609582 |
lung | carcinoma; squamous_cell_carcinoma | Substitution - Missense |
c.300C>T; p.F100F; 1:21614081-21614081 |
skin | malignant_melanoma | Substitution - coding silent |
c.1578G>A; p.G526G; 1:21601758-21601758 |
oesophagus; lower_third | carcinoma; adenocarcinoma | Substitution - coding silent |
c.1637C>T; p.P546L; 1:21601699-21601699 |
skin | malignant_melanoma | Substitution - Missense |
c.122_123insG; p.P42fs*16; 1:21617474-21617475 |
prostate | carcinoma; adenocarcinoma | Insertion - Frameshift |