Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

8711

Name

TNK1

Synonymous

tyrosine kinase, non-receptor, 1;TNK1;tyrosine kinase, non-receptor, 1

Definition

CD38 negative kinase 1|non-receptor tyrosine-protein kinase TNK1

Position

17p13.1

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

Top

We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

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The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

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Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.12.

The copy number variations for various cancers

Top

The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.402G>A; p.L134L; 17:7383592-7383592

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.953C>T; p.S318F; 17:7384570-7384570

skinmalignant_melanomaSubstitution - Missense

c.293G>A; p.R98Q; 17:7383483-7383483

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1965C>A; p.L655L; 17:7389048-7389048

large_intestine; colonNSSubstitution - coding silent

c.1149G>A; p.S383S; 17:7386572-7386572

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - coding silent

c.219G>T; p.K73N; 17:7383305-7383305

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.471G>A; p.P157P; 17:7383753-7383753

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.1711G>C; p.G571R; 17:7388624-7388624

pancreasNSSubstitution - Missense

c.1131G>T; p.L377L; 17:7384748-7384748

breastcarcinomaSubstitution - coding silent

c.1702C>T; p.H568Y; 17:7388615-7388615

upper_aerodigestive_tract; mouthcarcinomaSubstitution - Missense

c.1702C>T; p.H568Y; 17:7388615-7388615

upper_aerodigestive_tract; mouthcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.921G>A; p.W307*; 17:7384538-7384538

oesophaguscarcinoma; squamous_cell_carcinomaSubstitution - Nonsense

c.1675T>C; p.W559R; 17:7388588-7388588

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.85G>A; p.E29K; 17:7383011-7383011

prostatecarcinoma; adenocarcinomaSubstitution - Missense

c.1024C>T; p.L342L; 17:7384641-7384641

oesophagus; middle_thirdcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.1824_1825GG>AA; p.E609K; 17:7388820-7388821

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1685G>T; p.R562I; 17:7388598-7388598

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1515A>G; p.S505S; 17:7388428-7388428

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.844C>G; p.P282A; 17:7384231-7384231

thyroidother; neoplasmSubstitution - Missense

c.43C>T; p.R15W; 17:7382969-7382969

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1761C>T; p.S587S; 17:7388674-7388674

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.1282C>T; p.R428C; 17:7387024-7387024

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.1535G>A; p.R512H; 17:7388448-7388448

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1072C>T; p.R358C; 17:7384689-7384689

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.312delG; p.G106fs*5; 17:7383502-7383502

large_intestine; coloncarcinoma; adenocarcinomaDeletion - Frameshift

c.1638T>G; p.S546S; 17:7388551-7388551

livercarcinomaSubstitution - coding silent

c.1638T>G; p.S546S; 17:7388551-7388551

livercarcinomaSubstitution - coding silent

c.705C>T; p.Y235Y; 17:7384092-7384092

central_nervous_system; brainglioma; astrocytoma_Grade_IVSubstitution - coding silent

c.966A>C; p.E322D; 17:7384583-7384583

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.468C>T; p.G156G; 17:7383750-7383750

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - coding silent

c.200G>A; p.R67H; 17:7383286-7383286

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1453C>T; p.R485W; 17:7387418-7387418

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.1453C>T; p.R485W; 17:7387418-7387418

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.951C>A; p.F317L; 17:7384568-7384568

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.570G>T; p.Q190H; 17:7383852-7383852

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1677G>A; p.W559*; 17:7388590-7388590

lungcarcinoma; adenocarcinomaSubstitution - Nonsense

c.1344G>A; p.L448L; 17:7387086-7387086

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.1650C>A; p.S550R; 17:7388563-7388563

large_intestine; colonNSSubstitution - Missense

c.289C>T; p.P97S; 17:7383479-7383479

skinmalignant_melanomaSubstitution - Missense

c.1323G>A; p.T441T; 17:7387065-7387065

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.1455G>A; p.R485R; 17:7387420-7387420

skinmalignant_melanomaSubstitution - coding silent

c.1100G>A; p.R367Q; 17:7384717-7384717

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.935C>T; p.T312M; 17:7384552-7384552

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1432C>A; p.L478I; 17:7387397-7387397

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1338G>A; p.G446G; 17:7387080-7387080

skinmalignant_melanomaSubstitution - coding silent

c.1099C>T; p.R367W; 17:7384716-7384716

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.848G>A; p.R283H; 17:7384235-7384235

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.1686A>C; p.R562S; 17:7388599-7388599

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.738C>T; p.L246L; 17:7384125-7384125

ovaryother; neoplasmSubstitution - coding silent

c.1493G>A; p.G498D; 17:7388406-7388406

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1224C>T; p.I408I; 17:7386647-7386647

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.1224C>T; p.I408I; 17:7386647-7386647

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.1224C>T; p.I408I; 17:7386647-7386647

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.189G>A; p.L63L; 17:7383275-7383275

breastcarcinomaSubstitution - coding silent

c.1016G>A; p.R339K; 17:7384633-7384633

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.1016G>A; p.R339K; 17:7384633-7384633

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.1587G>A; p.V529V; 17:7388500-7388500

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.892G>A; p.G298R; 17:7384509-7384509

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1782G>A; p.K594K; 17:7388695-7388695

skinmalignant_melanomaSubstitution - coding silent

c.1089C>G; p.H363Q; 17:7384706-7384706

livercarcinomaSubstitution - Missense

c.21C>T; p.S7S; 17:7382947-7382947

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.21C>T; p.S7S; 17:7382947-7382947

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - coding silent

c.1762G>A; p.D588N; 17:7388675-7388675

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.1762G>T; p.D588Y; 17:7388675-7388675

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.712G>A; p.A238T; 17:7384099-7384099

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.1314G>A; p.S438S; 17:7387056-7387056

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - coding silent

c.1442C>T; p.A481V; 17:7387407-7387407

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1735G>A; p.A579T; 17:7388648-7388648

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1413-2A>G; p.?; 17:7387376-7387376

livercarcinoma; hepatocellular_carcinomaUnknown

c.1413-2A>G; p.?; 17:7387376-7387376

large_intestine; coloncarcinoma; adenocarcinomaUnknown


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