Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

94031

Name

HTRA3

Synonymous

HtrA serine peptidase 3;HTRA3;HtrA serine peptidase 3

Definition

high-temperature requirement factor A3|pregnancy-related serine protease|probable serine protease HTRA3|serine protease HTRA3

Position

4p16.1

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

Top

We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

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The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

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Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.09.

The copy number variations for various cancers

Top

The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.874G>A; p.D292N; 4:8291535-8291535

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.751C>T; p.R251W; 4:8291412-8291412

urinary_tract; bladdercarcinomaSubstitution - Missense

c.233G>A; p.R78H; 4:8270201-8270201

boneEwings_sarcoma-peripheral_primitive_neuroectodermal_tumourSubstitution - Missense

c.1064G>A; p.R355H; 4:8302475-8302475

livercarcinoma; hepatocellular_carcinomaSubstitution - Missense

c.991G>A; p.A331T; 4:8294141-8294141

ovarycarcinoma; serous_carcinomaSubstitution - Missense

c.262G>A; p.A88T; 4:8270230-8270230

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1324G>A; p.D442N; 4:8306098-8306098

skinmalignant_melanomaSubstitution - Missense

c.785C>T; p.P262L; 4:8291446-8291446

skinmalignant_melanomaSubstitution - Missense

c.152G>T; p.C51F; 4:8270120-8270120

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.925C>T; p.L309L; 4:8292342-8292342

breastcarcinomaSubstitution - coding silent

c.474G>T; p.E158D; 4:8282525-8282525

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.1276G>A; p.V426M; 4:8306050-8306050

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.745G>A; p.D249N; 4:8291406-8291406

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1236C>A; p.N412K; 4:8306010-8306010

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.1313G>A; p.R438Q; 4:8306087-8306087

prostatecarcinomaSubstitution - Missense

c.1313G>A; p.R438Q; 4:8306087-8306087

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.1120G>A; p.A374T; 4:8304203-8304203

skinmalignant_melanomaSubstitution - Missense

c.1120G>A; p.A374T; 4:8304203-8304203

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1318A>G; p.N440D; 4:8306092-8306092

thyroidother; neoplasmSubstitution - Missense

c.907G>A; p.G303R; 4:8292324-8292324

skinmalignant_melanomaSubstitution - Missense

c.1146C>T; p.V382V; 4:8304229-8304229

kidneyother; neoplasmSubstitution - coding silent

c.1307T>G; p.V436G; 4:8306081-8306081

pancreascarcinomaSubstitution - Missense

c.1056G>A; p.W352*; 4:8302467-8302467

skinmalignant_melanomaSubstitution - Nonsense

c.1085G>A; p.R362Q; 4:8302496-8302496

skinmalignant_melanomaSubstitution - Missense

c.1188T>G; p.P396P; 4:8304271-8304271

ovarycarcinoma; serous_carcinomaSubstitution - coding silent

c.460G>A; p.V154M; 4:8282511-8282511

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.1342G>T; p.A448S; 4:8306116-8306116

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1161T>A; p.Y387*; 4:8304244-8304244

breastcarcinomaSubstitution - Nonsense

c.906C>A; p.Y302*; 4:8292323-8292323

lungcarcinoma; squamous_cell_carcinomaSubstitution - Nonsense

c.887C>T; p.T296M; 4:8291548-8291548

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.887C>T; p.T296M; 4:8291548-8291548

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.1104G>C; p.L368L; 4:8304187-8304187

pancreascarcinomaSubstitution - coding silent

c.1078C>T; p.R360W; 4:8302489-8302489

oesophaguscarcinomaSubstitution - Missense

c.1094C>T; p.T365I; 4:8302505-8302505

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.639C>T; p.D213D; 4:8286714-8286714

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.836G>A; p.R279Q; 4:8291497-8291497

central_nervous_system; braingliomaSubstitution - Missense

c.1238G>A; p.G413E; 4:8306012-8306012

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.510G>A; p.V170V; 4:8286585-8286585

livercarcinomaSubstitution - coding silent

c.510G>A; p.V170V; 4:8286585-8286585

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.1241G>A; p.R414H; 4:8306015-8306015

pancreascarcinomaSubstitution - Missense

c.820G>A; p.V274I; 4:8291481-8291481

central_nervous_system; braingliomaSubstitution - Missense

c.842G>T; p.G281V; 4:8291503-8291503

kidneyother; neoplasmSubstitution - Missense

c.49G>T; p.A17S; 4:8270017-8270017

pancreascarcinoma; acinar_carcinomaSubstitution - Missense

c.668A>G; p.D223G; 4:8286743-8286743

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.666C>T; p.I222I; 4:8286741-8286741

skinmalignant_melanomaSubstitution - coding silent

c.223G>A; p.E75K; 4:8270191-8270191

skinmalignant_melanomaSubstitution - Missense

c.968A>C; p.K323T; 4:8294118-8294118

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.819C>T; p.I273I; 4:8291480-8291480

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.1015C>T; p.R339W; 4:8294165-8294165

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.65C>T; p.A22V; 4:8270033-8270033

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1342G>A; p.A448T; 4:8306116-8306116

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.948C>A; p.V316V; 4:8294098-8294098

thyroidother; neoplasmSubstitution - coding silent

c.675G>T; p.K225N; 4:8286750-8286750

pancreascarcinomaSubstitution - Missense

c.574G>A; p.V192M; 4:8286649-8286649

urinary_tract; bladdercarcinomaSubstitution - Missense

c.914_915CC>TT; p.S305F; 4:8292331-8292332

skinmalignant_melanomaSubstitution - Missense

c.1208A>G; p.Q403R; 4:8305982-8305982

skinmalignant_melanomaSubstitution - Missense

c.1208A>G; p.Q403R; 4:8305982-8305982

skinmalignant_melanomaSubstitution - Missense

c.1208A>G; p.Q403R; 4:8305982-8305982

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1208A>G; p.Q403R; 4:8305982-8305982

central_nervous_system; brainglioma; astrocytoma_Grade_IVSubstitution - Missense

c.1208A>G; p.Q403R; 4:8305982-8305982

central_nervous_system; brainglioma; astrocytoma_Grade_IVSubstitution - Missense

c.1208A>G; p.Q403R; 4:8305982-8305982

prostatecarcinoma; adenocarcinomaSubstitution - Missense

c.842G>A; p.G281D; 4:8291503-8291503

skinmalignant_melanomaSubstitution - Missense

c.483G>A; p.L161L; 4:8282534-8282534

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.483G>A; p.L161L; 4:8282534-8282534

urinary_tract; bladdercarcinomaSubstitution - coding silent

c.1088C>T; p.T363M; 4:8302499-8302499

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.503G>A; p.R168H; 4:8286578-8286578

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1323C>T; p.D441D; 4:8306097-8306097

boneEwings_sarcoma-peripheral_primitive_neuroectodermal_tumourSubstitution - coding silent

c.992C>T; p.A331V; 4:8294142-8294142

urinary_tract; bladdercarcinomaSubstitution - Missense

c.586A>C; p.N196H; 4:8286661-8286661

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1285G>A; p.E429K; 4:8306059-8306059

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaSubstitution - Missense

c.634G>A; p.G212R; 4:8286709-8286709

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.410G>A; p.R137H; 4:8282461-8282461

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.777C>T; p.I259I; 4:8291438-8291438

skinmalignant_melanomaSubstitution - coding silent

c.835C>T; p.R279W; 4:8291496-8291496

central_nervous_system; cerebellumprimitive_neuroectodermal_tumour-medulloblastoma; SHH_subtypeSubstitution - Missense

c.1311G>A; p.R437R; 4:8306085-8306085

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - coding silent

c.835C>T; p.R279W; 4:8291496-8291496

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastoma; medullomyoblastomaSubstitution - Missense

c.1179G>A; p.P393P; 4:8304262-8304262

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.1179G>A; p.P393P; 4:8304262-8304262

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.1312C>T; p.R438W; 4:8306086-8306086

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.1179G>A; p.P393P; 4:8304262-8304262

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - coding silent

c.1212T>C; p.D404D; 4:8305986-8305986

livercarcinomaSubstitution - coding silent

c.1212T>C; p.D404D; 4:8305986-8305986

lungcarcinoma; adenocarcinomaSubstitution - coding silent

c.637G>A; p.D213N; 4:8286712-8286712

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.501C>T; p.G167G; 4:8286576-8286576

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.514C>T; p.L172L; 4:8286589-8286589

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.1161T>G; p.Y387*; 4:8304244-8304244

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Nonsense

c.837G>A; p.R279R; 4:8291498-8291498

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.943G>A; p.E315K; 4:8294093-8294093

skinmalignant_melanomaSubstitution - Missense


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