Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

10399

Name

GNB2L1

Synonymous

Gnb2-rs1|H12.3|HLC-7|PIG21|RACK1;guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1;GNB2L1;guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1

Definition

cell proliferation-inducing gene 21 protein|guanine nucleotide binding protein beta polypeptide 2-like 1|guanine nucleotide-binding protein subunit beta-2-like 1|guanine nucleotide-binding protein subunit beta-like protein 12.3|human lung cancer oncogene

Position

5q35.3

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

RACK1(h) + STAT1(h) <==> RACK1(h):STAT1(h) (binding)
IFNAR2(h) + RACK1(h) <==> IFNAR2(h):RACK1(h) (binding)
beta2-integrin(h) + RACK1(h) <==> beta2-integrin(h):RACK1(h) (binding)
beta1-integrin(h) + RACK1(h) <==> beta1-integrin(h):RACK1(h) (binding)
alphaL-integrin(h):beta2-integrin(h) + RACK1(h) <==> alphaL-integrin(h):beta2-integrin(h):RACK1(h) (binding)
RACK1(h) + p73alpha(v.s.) <==> RACK1(h):p73alpha(v.s.) (binding)
RACK1(h) + pRb(h) <==> RACK1(h):pRb(h) (binding)
PDE4D5(h) + RACK1(h) <==> PDE4D5(h):RACK1(h) (binding)
RACK1(h) + IL-5Rbeta(m.s.) <==> RACK1(h):IL-5Rbeta(m.s.) (binding)
RACK1(h) + PLCgamma1(b) <==> RACK1(h):PLCgamma1(b) (binding)
RACK1(h) + RasGAP(m.s.) <==> RACK1(h):RasGAP(m.s.) (binding)
RACK1(h) + Src(m) <==> RACK1(h):Src(m) (binding)
RACK1(h) + ATRAP-isoform1(h) <==> RACK1(h):ATRAP-isoform1(h) (binding)
RACK1(h) + Tilz2(h) <==> RACK1(h):Tilz2(h) (binding)
RACK1(h) + PTN(h) <==> RACK1(h):PTN(h) (binding)
GOLPH2(h) + RACK1(h) <==> GOLPH2(h):RACK1(h) (binding)
FATP-6(h) + RACK1(h) <==> FATP-6(h):RACK1(h) (binding)
Jak1(h) + SHP-2(h) + PKCbeta(h) + RACK1(h) <==> RACK1(h):SHP-2(h):Jak1(h):PKCbeta(h) (binding)
AdipoR1(h) + RACK1(h) <==> AdipoR1(h):RACK1(h) (binding)
GNB2L1(h) --> RACK1(h) (expression).
RACK1(h) + PDE4D5(h) <==> RACK1(h):PDE4D5(h) (binding)
RACK1(h) + GR-alpha(h) <==> RACK1(h):GR-alpha(h) (binding)
IL-5Rbeta-isoform1(h) + RACK1(h) <==> IL-5Rbeta-isoform1(h):RACK1(h) (binding)
RACK1(h) + Src-isoform-1(c) <==> RACK1(h):Src-isoform-1(c) (binding)
RACK1(h) + ATP --Src-isoform-1(c)--> RACK1(h){pY} + ADP (phosphorylation)
RACK1(h) + ATP --> RACK1(h){pY} + ADP (phosphorylation)
TRPM6(m.s.) + RACK1(h) <==> TRPM6(m.s.):RACK1(h) (binding)
AdipoR1(h) + RACK1(h) <==> AdipoR1(h):RACK1(h) (binding)
GNB2L1(h) --> RACK1(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

2N-acetylthreonine.Swiss-Prot 53.0
228Phosphotyrosine.Swiss-Prot 53.0
227Phosphotyrosine (Src)12400005Phospho.ELM 6.0
245Phosphotyrosine (Src)12400005Phospho.ELM 6.0
193Phosphotyrosine (Tyk2)15240704Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr5

Promoter: 180603012 - 180605012Agilent_014791

chr5

Promoter: 180603012 - 180605012GSE27584


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