Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

1045

Name

CDX2

Synonymous

CDX-3|CDX2/AS|CDX3;caudal type homeobox 2;CDX2;caudal type homeobox 2

Definition

caudal type homeo box transcription factor 2|caudal type homeobox transcription factor 2|caudal-type homeobox protein 2|homeobox protein CDX-2

Position

13q12.3

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

Cdx-2(h) --> Lct(pg) (DNA binding).
Cdx-2(h) --> GUCY2C(h) (DNA binding).
Cdx-2(h) --> BCL2(h) (DNA binding).
Cdx-2(h) --> MUC2(h) (DNA binding; transactivation).
Cdx-2(h) --> Glc6Pase(r) (DNA binding).
Cdx-2(h) --> CLDN2(h) (DNA binding).
Cdx-2(h) --> RAGE(h) (DNA binding; transactivation).
Cdx-2(h) --> SI(h) (DNA binding).
Cdx-2(h) --> NOX1(h) (DNA binding).
Cdx-2(h) --> MUC4(h) (DNA binding).
Cdx-2(h) --> ACAT2(h) (DNA binding).
CDX2(h) --> Cdx-2(h) (expression).
beta-catenin(h) --> Cdx-2(h) (increase of abundance)
Cdx-2(h) --> UGT1A8(h) (DNA binding; transactivation).
Cdx-2(h) --> UGT1A10(h) (DNA binding; transactivation).
Cdx-2(h) --> Fabp1(r) (transactivation)
HNF-1alpha(m) + Cdx-2(h) <==> HNF-1alpha(m):Cdx-2(h) (binding)
HNF-1beta(m) + Cdx-2(h) <==> HNF-1beta(m):Cdx-2(h) (binding)
Cdx-2(h) --> SI(h) (DNA binding).
Cdx-2(h) --> NOX1(h) (DNA binding).
Cdx-2(h) --> p21Cip1(h) (increase of abundance)
Cdx-2(h) --> CDKN1A(h) (transactivation)
Cdx-2(h) --/ p16INK4a(h) (decrease of abundance)
Cdx-2(h) --/ p27Kip1(h) (decrease of abundance)
Cdx-2(h) --/ cyclinD1(h) (decrease of abundance)
Cdx-2(h) --/ cyclinA(h) (decrease of abundance)
Cdx-2(h) --/ pRb(h) (decrease of abundance)
Cdx-2(h) --/ pRb(h){p} (decrease of abundance)
Cdx-2(h) --> B3GALT5(h) (transactivation)
Cdx-2(h) --> MUC2(h) (transactivation)
CDX2(h) --> Cdx-2(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

60Phosphoserine (By similarity).Swiss-Prot 53.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr13

Promoter: 27440817 - 27442817Agilent_014791

chr13

Promoter: 27440817 - 27442817GSE27584

chr13

Promoter: 27440817 - 27442817Agilent_014791_44K

chr13

Promoter: 27440817 - 27442817PMID:15706431

chr13

Promoter: 27440817 - 27442817PMID:15498792


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