Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

472

Name

ATM

Synonymous

AT1|ATA|ATC|ATD|ATDC|ATE|TEL1|TELO1;ATM serine/threonine kinase;ATM;ATM serine/threonine kinase

Definition

A-T mutated|AT mutated|TEL1, telomere maintenance 1, homolog|ataxia telangiectasia mutated|serine-protein kinase ATM

Position

11q22-q23

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

mdm2(h) + ATM(h) <==> mdm2(h):ATM(h) (binding)
ATM(h) + p53(h) <==> ATM(h):p53(h) (binding)
ATM(h) --Caspase-3(h)--> protein remnants (processing)
ATM(h) --Caspase-7(h)--> protein remnants (processing)
ATM(h) + ATP --> ATM(h){pS1981} + ADP (phosphorylation; automodification)
ATM(h) + MOF(h) <==> ATM(h):MOF(h) (binding)
ATM(h) + Wip1(h) <==> ATM(h):Wip1(h) (binding)
Wip1(m.s.) + ATM(h) <==> Wip1(m.s.):ATM(h) (binding)
ATM(h) --> protein remnants (cleavage)
ATM(h) --Caspase-3(m.s.)--> ATM-p210(h) + ATM-p150(h) + protein remnants (cleavage)
ATM(h) --> ATM-p210(h) + protein remnants (cleavage)
ATM(h) + BAAT1(h) <==> ATM(h):BAAT1(h) (binding)
ATM(h) --> ATM(h) (translocation)
ATM(h) + PP2A(h) <==> ATM(h):PP2A(h) (binding)
ATM(h) + ATP --> ATM(h){pS1981} + ADP (phosphorylation)
ATM(h) --> brca1(h):Mre11(h) (increase of binding)
RFC4(h) + RFC2(h) + MLH1(h) + MSH2(h) + RECC1(h) + BLM(h) + ATM(h) + brca1(h) + GTBP(h) <==> RFC4(h):RFC2(h):MLH1(h):MSH2(h):RECC1(h):BLM(h):ATM(h):brca1(h):GTBP(h) (binding)
ATM(h) + brca1(h) <==> ATM(h):brca1(h) (binding)
ATM(h) + RECC1(h) <==> ATM(h):RECC1(h) (binding)
GTBP(h) + ATM(h) <==> GTBP(h):ATM(h) (binding)
BLM(h) + ATM(h) <==> BLM(h):ATM(h) (binding)
ATM(h) + Rad50(h) <==> ATM(h):Rad50(h) (binding)
ATM(h) + Mre11(h) <==> ATM(h):Mre11(h) (binding)
ATM(h) + MSH2(h) <==> ATM(h):MSH2(h) (binding)
ATM(h) + MLH1(h) <==> ATM(h):MLH1(h) (binding)
BLM(h) + Rad50(h) + MSH2(h) + ATM(h) + brca1(h) + RECC1(h) <==> BLM(h):Rad50(h):MSH2(h):ATM(h):brca1(h):RECC1(h) (binding)
ATM(h) --> brca1(h){p}n (increase of phosphorylation)
ATM(h) + ATP --> ATM(h){p} + ADP (phosphorylation)
ATM(h) + ATP --> ATM(h){p} + ADP (automodification)
ATM(h) + obfc2b(h) <==> ATM(h):obfc2b(h) + ATM(h):obfc2b(h) (binding)
ATM(h) + Apak(h) <==> ATM(h):Apak(h) (binding)
HDAC1(h) + RNF96(h) + Apak(h) + ATM(h) + p53(h) <==> HDAC1(h):RNF96(h):Apak(h):ATM(h):p53(h) (binding)
p53(h) + Apak(h) + ATM(h) <==> p53(h):Apak(h):ATM(h) (binding)
H2O2 --> ATM(h) (activation)
ATM(h) --> ATM(h) (expression).
ATM(h) --> ATM(h) (translocation)
ATM(h){pS1981} --PP2A(h)--> ATM(h) + p (dephosphorylation)
p53(h) + ATP --ATM(h)--> p53(h){pS15} + ADP (phosphorylation)
p53(h) + ATP --ATM(h)--> p53(h){pS20} + ADP (phosphorylation)
Chk2(h) + ATP --ATM(h)--> Chk2(h){pT68} + ADP (phosphorylation)
53BP1(h) + ATP --ATM(h)--> 53BP1(h){p} + ADP (phosphorylation)
LKB1(m) + ATP --ATM(h)--> LKB1(m){pT366} + ADP (phosphorylation)
Chk1(v.s.) + ATP --ATM(h)--> Chk1(v.s.){pS345} + ADP (phosphorylation)
mdm2(h) + ATP --ATM(h)--> mdm2(h){p} + ADP (phosphorylation)
mdm2(h) + ATP --ATM(h)--> mdm2(h){pS395} + ADP (phosphorylation)
p53(m.s.) + ATP --ATM(h)--> p53(m.s.){pS15} + ADP (phosphorylation)
Bid(m) + 2 ATP --ATM(h)--> Bid(m){pS61}{pS78} + 2 ADP (phosphorylation)
Bid(h) + ATP --ATM(h)--> Bid(h){pS78} + ADP (phosphorylation)
Artemis-isoform1(h) + 3 ATP --ATM(h)--> Artemis-isoform1(h){pS503}{pS516}{pS645} + 3 ADP (phosphorylation)
Artemis(h) + ATP --ATM(h)--> Artemis(h){pS645} + ADP (phosphorylation)
Mdm4(h) + ATP --ATM(h)--> Mdm4(h){pS403} + ADP (phosphorylation)
CREB(h) + 3 ATP --ATM(h)--> CREB(h){pT100}{pS111}{pS121} + 3 ADP (phosphorylation)
CREB1(h) + ATP --ATM(h)--> CREB1(h){pS121} + ADP (phosphorylation)
p53(m.s.) + ATP --ATM(h)--> p53(m.s.){p} + ADP (phosphorylation)
BAF170(h) + ATP --ATM(h)--> BAF170(h){pS969} + ADP (phosphorylation)
MOF(h) + ATM(h) <==> MOF(h):ATM(h) (binding)
ATM(h) + MOF-isoform1(h) <==> ATM(h):MOF-isoform1(h) (binding)
2 ATM(h) <==> (ATM(h))2 (oligomerization)
ATM(h) + ATP --> ATM(h){pS1981} + ADP (phosphorylation; automodification)
ATM(h) + 2 ATP --ATM(m.s.)--> ATM(h){pS440}{pS2761} + 2 ADP (phosphorylation)
ATM(h) + 2 ATP --ATR(m.s.)--> ATM(h){pS440}{pS2761} + 2 ADP (phosphorylation)
ATM(h) + ATP --DNA-PK(m.s.)--> ATM(h){pS440} + ADP (phosphorylation)
ATM(h) --/ bbc3(h) (transrepression)
ATM(h) --/ P53AIP1(h) (transrepression)
ATM(h) --/ PMAIP1(h) (transrepression)
ATM(h) --/ CDKN1A(h) (transrepression)
ATM(h) --/ SFN(h) (transrepression)
ATM(h) --> ATM(h) (expression).
ATM(h){pS1981} --Wip1(h)--> ATM(h) + p (dephosphorylation)
ATM(h){pS1981} --Wip1(m.s.)--> ATM(h) + p (dephosphorylation)
ATM(h){pS1981} --PP2A(m.s.)--> ATM(h) + p (dephosphorylation)
p53(m.s.) + ATP --ATM(h)--> p53(m.s.){pS15} + ADP (phosphorylation)
Bid(m) + 2 ATP --ATM(h)--> Bid(m){pS61}{pS78} + 2 ADP (phosphorylation)

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

1981Phosphoserine (by autocatalysis).Swiss-Prot 53.0
1981Phosphoserine (ATM)12556884;15302935Phospho.ELM 6.0
1987Phosphoserine15302935Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr11

Promoter: 107597269 - 107599269GSE27584

chr11

Promoter: 107597269 - 107599269Agilent_014791_44K

chr11

Promoter: 107597269 - 107599269Agilent_014791

chr11

Promoter: 107597269 - 107599269PMID:17378912

chr11

Promoter: 107661829 - 107663829PMID:17378912

chr11

Promoter: 107597269 - 107599269PMID:15386372

chr11

Promoter: 107661829 - 107663829PMID:15386372


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