Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5411

Name

PNN

Synonymous

DRS|DRSP|SDK3|memA;pinin, desmosome associated protein;PNN;pinin, desmosome associated protein

Definition

140 kDa nuclear and cell adhesion-related phosphoprotein|SR-like protein|desmosome-associated protein|domain-rich serine protein|melanoma metastasis clone A protein|neutrophil protein|nuclear protein SDK3|pinin

Position

14q21.1

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

Pinin(h) + PRP4K(h) <==> Pinin(h):PRP4K(h) (binding)
Pinin(h) + PRP4K(h) <==> Pinin(h):PRP4K(h) (binding)
Ku70(h) + Ccte(h) + Pds5A(h) + PPIL1(h) + eIF-3gamma(h) + SAFB1(h) + Wapl(h) + Rad21(h) + SMC-3(h) + SMC1(h) + CAPER-alpha(h) + CNOT3(h) + NCoA-5(h) + SIAHBP1(h) + FBP(h) + HYPA(h) + SKIP(h) + SRm300(h) + SRm160(h) + p54nrb/NonO(h) + rbm25(h) + rbm8A(h) + Pinin(h) + Prp19(h) + cdc5L(h) + Snrp116(h) + Prpf8(h) + Sf3b-4(h) + Sf3b-2(h) + hnRNPM(h) + hnRNP-G(h) <==> Ku70(h):Ccte(h):Pds5A(h):PPIL1(h):eIF-3gamma(h):SAFB1(h):Wapl(h):Rad21(h):SMC-3(h):SMC1(h):CAPER-alpha(h):CNOT3(h):NCoA-5(h):SIAHBP1(h):FBP(h):HYPA(h):SKIP(h):SRm300(h):SRm160(h):p54nrb/NonO(h):rbm25(h):rbm8A(h):Pinin(h):Prp19(h):cdc5L(h):Snrp116(h):Prpf8(h):Sf3b-4(h):Sf3b-2(h):hnRNPM(h):hnRNP-G(h) (binding)
rnps1(h) + Pinin(h) <==> rnps1(h):Pinin(h) (binding)
IKBL(h) + Pinin(h) <==> IKBL(h):Pinin(h) (binding)
Keratin-18(h) + Pinin(h) <==> Keratin-18(h):Pinin(h) (binding)
Keratin-8(h) + Pinin(h) <==> Keratin-8(h):Pinin(h) (binding)
Keratin-19(h) + Pinin(h) <==> Keratin-19(h):Pinin(h) (binding)
Keratin(ca) + Pinin(h) <==> Keratin(ca):Pinin(h) (binding)
Pinin(h) + CAPER-alpha(h) <==> Pinin(h):CAPER-alpha(h) (binding)
PNN(h) --> Pinin(h) (expression).
Sfrs10(h) --> Pinin(h) (binding)
PNN(h) --> Pinin-1(h) (expression).
PNN(h) --> Pinin-2(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

2N-acetylalanine.Swiss-Prot 53.0
66Phosphoserine.Swiss-Prot 53.0
100Phosphoserine.Swiss-Prot 53.0
347Phosphoserine.Swiss-Prot 53.0
381Phosphoserine.Swiss-Prot 53.0
441Phosphoserine (By similarity).Swiss-Prot 53.0
443Phosphoserine.Swiss-Prot 53.0
658Phosphoserine.Swiss-Prot 53.0
692Phosphoserine.Swiss-Prot 53.0
689Phosphoserine15302935Phospho.ELM 6.0
442Phosphoserine16565220;17081983Phospho.ELM 6.0
346Phosphoserine16565220;17081983Phospho.ELM 6.0
65Phosphoserine17081983Phospho.ELM 6.0
99Phosphoserine17081983Phospho.ELM 6.0
380Phosphoserine17081983Phospho.ELM 6.0
412Phosphoserine17081983Phospho.ELM 6.0
656Phosphothreonine17081983Phospho.ELM 6.0
657Phosphoserine17081983Phospho.ELM 6.0
691Phosphoserine17081983Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr14

Promoter: 38712651 - 38714651GSE27584

chr14

Promoter: 38712651 - 38714651Agilent_014791_44K


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