General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information |
|
---|---|
Gene ID | 57142 |
Name | RTN4 |
Synonymous | ASY|NI220/250|NOGO|NOGO-A|NOGOC|NSP|NSP-CL|Nbla00271|Nbla10545|Nogo-B|Nogo-C|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C;reticulon 4;RTN4;reticulon 4 |
Definition | Human NogoA|My043 protein|foocen|neurite growth inhibitor 220|neurite outgrowth inhibitor|neuroendocrine-specific protein C homolog|reticulon 5|reticulon-4 |
Position | 2p16.3 |
Gene Type | protein-coding |
Gene Regulation: | Upstream microRNAs Transcription Factors Post Transcriptional Modification From dbPTM Methylation Profile From DiseaseMeth database |
Experimentally verified miRNA from miRTarBase [Top] |
Transcription Factors [Top] |
Regulation From TransFac database |
Nogo-isoform1(h) + Caspr(r) <==> Nogo-isoform1(h):Caspr(r) (binding) | Caspr(m) + Nogo-isoform1(h) + Kv1.1(m) <==> Caspr(m):Nogo-isoform1(h):Kv1.1(m) (binding) | Caspr(r) + Nogo-isoform1(h) + Kv1.1(r) <==> Caspr(r):Nogo-isoform1(h):Kv1.1(r) (binding) | RTN4(h) --> Nogo-isoform1(h) (expression). | SIRT2(h) + Nogo(h) <==> SIRT2(h):Nogo(h) (binding) | lrch4(h) + Nogo(h) <==> lrch4(h):Nogo(h) (binding) | SNAP-alpha(h) + Nogo(h) <==> SNAP-alpha(h):Nogo(h) (binding) | RabS10(h) + Nogo(h) <==> RabS10(h):Nogo(h) (binding) | FXR2(h) + Nogo(h) <==> FXR2(h):Nogo(h) (binding) | GPBP(h) + Nogo(h) <==> GPBP(h):Nogo(h) (binding) | NSPL2(h) + Nogo(h) <==> NSPL2(h):Nogo(h) (binding) | Maspardin(h) + Nogo(h) <==> Maspardin(h):Nogo(h) (binding) | Nogo(h) + plekhf2(h) <==> Nogo(h):plekhf2(h) (binding) | RTN4(h) --> Nogo(h) (expression). | RTN4(h) --> Nogo-isoform2(h) (expression). | RTN4(h) --> Nogo-isoform3(h) (expression). | RTN4(h) --> Nogo-isoform4(h) (expression). |
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Post Transcriptional Modification [Top] | |||
Location (AA) |
PTM type |
Literature |
Database |
7 | Phosphoserine. | Swiss-Prot 53.0 | 15 | Phosphoserine. | Swiss-Prot 53.0 | 107 | Phosphoserine. | Swiss-Prot 53.0 | 152 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 182 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 184 | Phosphoserine. | Swiss-Prot 53.0 | 188 | Phosphothreonine. | Swiss-Prot 53.0 | 446 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 860 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 863 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 881 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 889 | Phosphotyrosine (By similarity). | Swiss-Prot 53.0 | 7 | Phosphoserine | 17081983 | Phospho.ELM 6.0 | 15 | Phosphoserine | 17081983 | Phospho.ELM 6.0 | 107 | Phosphoserine | 17081983 | Phospho.ELM 6.0 |
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Methylation Profile [Top] | ||
Chromosome |
Location |
Source |
---|---|---|
chr2 |
Promoter: 55130738 - 55132738 | Agilent_014791 |
chr2 |
Promoter: 55129330 - 55131330 | Agilent_014791 |
chr2 |
Promoter: 55130738 - 55132738 | GSE27584 |
chr2 |
Promoter: 55129330 - 55131330 | GSE27584 |
chr2 |
Promoter: 55130738 - 55132738 | GSE27584 |
chr2 |
Promoter: 55130738 - 55132738 | GSE27584 |
chr2 |
Promoter: 55129330 - 55131330 | Agilent_014791_44K |