Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020514 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr1 103502714 104045336 p21.1 RN7SKP285, ACTG1P4, ENSG00000303719, AMY2A, ENSG00000234441, ENSG00000306135, AMYP1, AMY1C, ENSG00000225191, AMY2B, AMY1A, AMY1B, RNPC3-DT, RNPC3 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020515 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr1 103525910 104068532 p21.1 ACTG1P4, ENSG00000303719, AMY2A, ENSG00000234441, ENSG00000306135, AMYP1, AMY1C, ENSG00000225191, AMY2B, AMY1A, AMY1B, RNPC3-DT, RNPC3, THAP3P1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020516 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr1 103570538 104113160 p21.1 ACTG1P4, ENSG00000303719, AMY2A, ENSG00000234441, ENSG00000306135, AMYP1, AMY1C, ENSG00000225191, THAP3P1, AMY2B, AMY1A, AMY1B, THAP3P1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020517 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr1 103574833 104117455 p21.1 ENSG00000303719, AMY2A, ENSG00000234441, ENSG00000306135, AMYP1, AMY1C, ENSG00000225191, THAP3P1, AMY2B, AMY1A, AMY1B, THAP3P1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020518 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr1 103650661 104193283 p21.1 ENSG00000234441, ENSG00000306135, AMYP1, AMY1C, ENSG00000225191, THAP3P1, ENSG00000309848, FTLP17, AMY1A, AMY1B, THAP3P1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020519 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr1 178097732 178128597 q25.2 RASAL2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020520 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr2 176044391 176909119 q31.1 ENSG00000305042, ENSG00000309788, HOXD12, HOXD11, HOXD9, ENSG00000298646, HOXD8, MIR10B, HOXD4, ENSG00000272729, ENSG00000309756, HAGLROS, HOXD1, MIR7704, ENSG00000279160, ENSG00000218175, PPIAP67, NRAL, ENSG00000236231, ENSG00000306156, MIR1246, RNU6ATAC14P, FUCA1P1, RPL29P8, ENSG00000279205, ENSG00000306121, EVX2, HOXD13, HOXD10, HOXD-AS2, HAGLR, RPSAP25, ENSG00000307547, ENSG00000306098, ENSG00000306034, LINC01116, ENSG00000227098, MTX2, LINC01117, ENSG00000230552, ENSG00000303534, HOXD3 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020521 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr2 176474152 177338880 q31.1,q31.2 NRAL, ENSG00000236231, ENSG00000306156, MIR1246, RNU6ATAC14P, FUCA1P1, RPL29P8, ENSG00000279205, ENSG00000306121, RNU6-187P, ENSG00000308133, RNA5SP112, STUB1P1, Y_RNA, KRT8P40, MIR4444-1, DNAJC19P5, MIR3128, ENSG00000222043, ENSG00000271825, MIR6512, ENSG00000306098, ENSG00000306034, LINC01116, ENSG00000227098, ENSG00000308115, HNRNPA3, ENSG00000271996, LINC01117, ENSG00000230552, ENSG00000303534, NFE2L2, ENSG00000213963, ENSG00000229337 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020522 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr5 180700324 181273323 q35.3 RNU1-17P, OR2Y1, ENSG00000296385, ENSG00000280161, ENSG00000297867, LINC00847, ENSG00000286128, ZFP62, ENSG00000297921, ENSG00000294604, Y_RNA, RPS29P12, ENSG00000249287, TMEM69P2, ARPP19P1, RNU6-1036P, ENSG00000299859, MIR8089, ENSG00000241870, ENSG00000310358, ENSG00000298425, FOXO1B, ENSG00000248560, ENSG00000308702, TRIM7-AS2, TRIM7, TRIM7-AS1, ENSG00000248514, ENSG00000286644, MIR4638, ENSG00000247049, SNORD96A, SNORD95, ENSG00000295323, MGAT1, HEIH, BTNL8, BTNL3, BTNL9, OR2V1, OR2V2, LINC01962, TRIM41, ENSG00000304351, RACK1, TRIM52, ENSG00000299843, TRIM52-AS1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020523 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr16 10733146 10827003 p13.13 ENSG00000289073, ENSG00000310402, TVP23A, NUBP1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated