DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AREALPLIE
Uniprot ID:
Q8IUH4
Source protein:
Palmitoyltransferase ZDHHC13
Source gene:
ZDHHC13
Class:
DEG_APCC_DBOX_1
Location:
38:46
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8236
ASA_SCORE:
83
COIL:
0.9113
CONS_SCORE:
0.2799
DSS_SCORE:
0.2952
HELIX:
0.0498
FCONS_SCORE:
0.8595
RIG_SCORE:
0.8144
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L35P
TCGA-HU-A4GH
STAD
TCGA
AREALPLIE
DEG_APCC_DBOX_1
0.25
p.L35P
DO47743
STAD
ICGC
AREALPLIE
DEG_APCC_DBOX_1
0.25
p.V54F
DO229034
LICA
ICGC
AREALPLIE
DEG_APCC_DBOX_1
0.1111
p.V54F
DO229035
LICA
ICGC
AREALPLIE
DEG_APCC_DBOX_1
0.1111
p.A56V
SIDM00789
Colorectal Carcinoma
GDSC
AREALPLIE
DEG_APCC_DBOX_1
0.0556
p.A56V
ACH-000997
Colon/Colorectal Cancer
CCLE
AREALPLIE
DEG_APCC_DBOX_1
0.0556
p.A56V
ACH-001061
Colon/Colorectal Cancer
CCLE
AREALPLIE
DEG_APCC_DBOX_1
0.0556
p.A56V
HCT-15
large_intestine
COSMIC
AREALPLIE
DEG_APCC_DBOX_1
0.0556
p.A29S
SIDM00217
Colorectal Carcinoma
GDSC
AREALPLIE
DEG_APCC_DBOX_1
0.0833
p.A29S
ACH-000999
Colon/Colorectal Cancer
CCLE
AREALPLIE
DEG_APCC_DBOX_1
0.0833
p.A29S
SNU-1040
large_intestine
COSMIC
AREALPLIE
DEG_APCC_DBOX_1
0.0833
Drug responses associated with ZDHHC13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AREALPLIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IUH4
Palmitoyltransferase ZDHHC13
DEG_APCC_DBOX_1
38:46
AREALPLIE
APC,CDC20,FZR1
0.8236
More...