DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ARRVLQALE
Uniprot ID:
P39019
Source protein:
40S ribosomal protein S19
Source gene:
RPS19
Class:
DEG_APCC_DBOX_1
Location:
100:108
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.689
ASA_SCORE:
54.9667
COIL:
0.1813
CONS_SCORE:
0.7104
DSS_SCORE:
0.4277
HELIX:
0.7999
FCONS_SCORE:
1.2277
RIG_SCORE:
0.7857
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R101H
TCGA-CN-4728
HNSC
TCGA
ARRVLQALE
DEG_APCC_DBOX_1
0.8244
p.R101S
TCGA-D3-A2JP
SKCM
TCGA
ARRVLQALE
DEG_APCC_DBOX_1
0.7427
p.R102L
TCGA-D3-A3C7
SKCM
TCGA
ARRVLQALE
DEG_APCC_DBOX_1
0.7316
p.R102L
TCGA-VS-A94Z
CESC
TCGA
ARRVLQALE
DEG_APCC_DBOX_1
0.7316
p.R101L
SIDM00461
Acute Myeloid Leukemia
GDSC
ARRVLQALE
DEG_APCC_DBOX_1
0.8428
p.S90G
ACH-000710
Lung Cancer
CCLE
ARRVLQALE
DEG_APCC_DBOX_1
0.0556
Drug responses associated with RPS19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARRVLQALE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P39019
40S ribosomal protein S19
DEG_APCC_DBOX_1
100:108
ARRVLQALE
APC,CDC20,FZR1
0.689
More...