DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AYTTS
Uniprot ID:
Q9HBW1
Source protein:
Leucine-rich repeat-containing protein 4
Source gene:
LRRC4
Class:
DEG_SPOP_SBC_1
Location:
486:490
E3 ligase:
SPOP
DEGRON score:
0.9989
ASA_SCORE:
77.54
COIL:
0.6966
CONS_SCORE:
0.4064
DSS_SCORE:
0.4306
HELIX:
0.0368
FCONS_SCORE:
1.021
RIG_SCORE:
0.7807
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T492K
TCGA-44-8117
LUAD
TCGA
AYTTS
DEG_SPOP_SBC_1
0.2778
p.T492K
DO24028
LUAD
ICGC
AYTTS
DEG_SPOP_SBC_1
0.2778
p.Q484H
TCGA-A5-A1OF
UCEC
TCGA
AYTTS
DEG_SPOP_SBC_1
0.2778
p.Q484H
DO42568
UCEC
ICGC
AYTTS
DEG_SPOP_SBC_1
0.2778
p.P485S
TCGA-AP-A059
UCEC
TCGA
AYTTS
DEG_SPOP_SBC_1
0.3056
p.P485S
DO41361
UCEC
ICGC
AYTTS
DEG_SPOP_SBC_1
0.3056
p.T489N
DO229032
LICA
ICGC
AYTTS
DEG_SPOP_SBC_1
0.7055
p.Y487H
DO23296
LINC
ICGC
AYTTS
DEG_SPOP_SBC_1
0.6118
p.R499H
DO35484
PACA
ICGC
AYTTS
DEG_SPOP_SBC_1
0.0833
p.Q496H
SIDM00466
Ovarian Carcinoma
GDSC
AYTTS
DEG_SPOP_SBC_1
0.1667
p.Q496H
ACH-000443
Ovarian Cancer
CCLE
AYTTS
DEG_SPOP_SBC_1
0.1667
p.Q496H
OVKATE
ovary
COSMIC
AYTTS
DEG_SPOP_SBC_1
0.1667
p.T489I
SIDM00199
Chondrosarcoma
GDSC
AYTTS
DEG_SPOP_SBC_1
0.7078
p.T489I
ACH-002099
Bone Cancer
CCLE
AYTTS
DEG_SPOP_SBC_1
0.7078
p.T489I
CS1
bone
COSMIC
AYTTS
DEG_SPOP_SBC_1
0.7078
Drug responses associated with LRRC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AYTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HBW1
Leucine-rich repeat-containing protein 4
DEG_SPOP_SBC_1
486:490
AYTTS
SPOP
0.9989
More...