DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DRVKLFGIE
Uniprot ID:
Q9Y5H3
Source protein:
Protocadherin gamma-A10
Source gene:
PCDHGA10
Class:
DEG_APCC_DBOX_1
Location:
116:124
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5477
ASA_SCORE:
61.3778
COIL:
0.3991
CONS_SCORE:
0.5456
DSS_SCORE:
0.035
HELIX:
0.0103
FCONS_SCORE:
0.875
RIG_SCORE:
0.9142
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I112M
TCGA-BA-5152
HNSC
TCGA
DRVKLFGIE
DEG_APCC_DBOX_1
0.2222
p.I112M
DO14393
HNSC
ICGC
DRVKLFGIE
DEG_APCC_DBOX_1
0.2222
p.V107M
TCGA-C5-A2LX
CESC
TCGA
DRVKLFGIE
DEG_APCC_DBOX_1
0.0833
p.V107M
TCGA-D8-A1Y1
BRCA
TCGA
DRVKLFGIE
DEG_APCC_DBOX_1
0.0833
p.V107M
DO1398
BRCA
ICGC
DRVKLFGIE
DEG_APCC_DBOX_1
0.0833
p.V107M
DO49004
CESC
ICGC
DRVKLFGIE
DEG_APCC_DBOX_1
0.0833
p.V107M
DO50970
LICA
ICGC
DRVKLFGIE
DEG_APCC_DBOX_1
0.0833
p.D129N
TCGA-C5-A902
CESC
TCGA
DRVKLFGIE
DEG_APCC_DBOX_1
0.1944
p.D129N
DO49916
CESC
ICGC
DRVKLFGIE
DEG_APCC_DBOX_1
0.1944
p.I123V
SIDM00333
Endometrial Carcinoma
GDSC
DRVKLFGIE
DEG_APCC_DBOX_1
0.5965
p.I123V
ACH-000988
Endometrial/Uterine Cancer
CCLE
DRVKLFGIE
DEG_APCC_DBOX_1
0.5965
p.I123V
MFE-319
endometrium
COSMIC
DRVKLFGIE
DEG_APCC_DBOX_1
0.5965
Drug responses associated with PCDHGA10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DRVKLFGIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5H3
Protocadherin gamma-A10
DEG_APCC_DBOX_1
116:124
DRVKLFGIE
APC,CDC20,FZR1
0.5477
More...