DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGGSLT
Uniprot ID:
Q9HCN3
Source protein:
Post-GPI attachment to proteins factor 6
Source gene:
PGAP6
Class:
DEG_SCF_TRCP1_1
Location:
395:401
E3 ligase:
BTRC
DEGRON score:
0.8719
ASA_SCORE:
26.8
COIL:
0.4191
CONS_SCORE:
0.5818
DSS_SCORE:
0.3702
HELIX:
0.0149
FCONS_SCORE:
1.5684
RIG_SCORE:
0.7161
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R387Q
SIDM01943
Colorectal Carcinoma
GDSC
DSGGSLT
DEG_SCF_TRCP1_1
0.1111
p.S403T
SIDM00040
Gastric Carcinoma
GDSC
DSGGSLT
DEG_SCF_TRCP1_1
0.2778
p.G398D
SIDM01182
Bladder Carcinoma
GDSC
DSGGSLT
DEG_SCF_TRCP1_1
0.6087
p.R387W
SIDM00217
Colorectal Carcinoma
GDSC
DSGGSLT
DEG_SCF_TRCP1_1
0.1111
Drug responses associated with PGAP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGGSLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCN3
Post-GPI attachment to proteins factor 6
DEG_SCF_TRCP1_1
395:401
DSGGSLT
BTRC
0.8719
More...