DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGICMS
Uniprot ID:
P18848
Source protein:
Cyclic AMP-dependent transcription factor ATF-4
Source gene:
ATF4
Class:
DEG_SCF_TRCP1_1
Location:
218:224
E3 ligase:
BTRC
DEGRON score:
0.9897
ASA_SCORE:
75.5143
COIL:
0.877
CONS_SCORE:
0.5618
DSS_SCORE:
0.632
HELIX:
0.0376
FCONS_SCORE:
0.9279
RIG_SCORE:
0.6762
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G220C
TCGA-77-8153
LUSC
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.76
p.G220C
DO45426
LUSC
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.76
p.L229V
TCGA-C5-A1MK
CESC
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.1944
p.L229V
DO6290
CESC
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.1944
p.L229M
TCGA-CN-A63T
HNSC
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.1944
p.L229M
DO49040
HNSC
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.1944
p.P225Q
TCGA-D3-A2JO
SKCM
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.3056
p.P225Q
DO47619
SKCM
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.3056
p.S215L
TCGA-D3-A51R
SKCM
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.6944
p.S215L
DO47480
SKCM
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.6944
p.P214L
TCGA-D3-A8GI
SKCM
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.2222
p.P214L
DO50901
LICA
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.2222
p.P214L
DO50284
SKCM
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.2222
p.S227F
TCGA-EE-A3J7
SKCM
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.25
p.S227F
DO48770
SKCM
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.25
p.E211K
TCGA-FR-A728
SKCM
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.1389
p.E211K
DO48550
SKCM
ICGC
DSGICMS
DEG_SCF_TRCP1_1
0.1389
p.T213I
TCGA-OR-A5JD
ACC
TCGA
DSGICMS
DEG_SCF_TRCP1_1
0.1944
p.I208M
SIDM00622
Glioblastoma
GDSC
DSGICMS
DEG_SCF_TRCP1_1
0.0556
p.I208M
SIDM01323
Oral Cavity Carcinoma
GDSC
DSGICMS
DEG_SCF_TRCP1_1
0.0556
p.S219T
SIDM01613
Colorectal Carcinoma
GDSC
DSGICMS
DEG_SCF_TRCP1_1
0.8227
p.S219T
ACH-000199
Non-Cancerous
CCLE
DSGICMS
DEG_SCF_TRCP1_1
0.8227
p.I208V
ACH-001421
Eye Cancer
CCLE
DSGICMS
DEG_SCF_TRCP1_1
0.0556
Drug responses associated with ATF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGICMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18848
Cyclic AMP-dependent transcription factor ATF-4
DEG_SCF_TRCP1_1
218:224
DSGICMS
BTRC
0.9897
More...