DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGWLT
Uniprot ID:
Q9NPB8
Source protein:
Glycerophosphocholine phosphodiesterase GPCPD1
Source gene:
GPCPD1
Class:
DEG_SCF_TRCP1_1
Location:
123:128
E3 ligase:
BTRC
DEGRON score:
0.6931
ASA_SCORE:
51.3833
COIL:
0.5262
CONS_SCORE:
0.398
DSS_SCORE:
0.1984
HELIX:
0.0435
FCONS_SCORE:
1.2712
RIG_SCORE:
0.84
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F113L
TCGA-56-8622
LUSC
TCGA
DSGWLT
DEG_SCF_TRCP1_1
0.0556
p.F113L
DO45449
LUSC
ICGC
DSGWLT
DEG_SCF_TRCP1_1
0.0556
p.F113S
TCGA-DX-AB32
SARC
TCGA
DSGWLT
DEG_SCF_TRCP1_1
0.0556
p.F113S
DO220102
SARC
ICGC
DSGWLT
DEG_SCF_TRCP1_1
0.0556
p.C129Y
TCGA-XF-A9T5
BLCA
TCGA
DSGWLT
DEG_SCF_TRCP1_1
0.3056
p.C129Y
DO51925
BLCA
ICGC
DSGWLT
DEG_SCF_TRCP1_1
0.3056
p.R136H
DO222501
COCA
ICGC
DSGWLT
DEG_SCF_TRCP1_1
0.1111
p.T121P
DO222762
COCA
ICGC
DSGWLT
DEG_SCF_TRCP1_1
0.2778
p.D123E
DO50319
ESAD
ICGC
DSGWLT
DEG_SCF_TRCP1_1
0.6758
Drug responses associated with GPCPD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGWLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NPB8
Glycerophosphocholine phosphodiesterase GPCPD1
DEG_SCF_TRCP1_1
123:128
DSGWLT
BTRC
0.6931
More...