DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DTSLGLVPSGA
Uniprot ID:
Q9UBR4
Source protein:
LIM/homeobox protein Lhx3
Source gene:
LHX3
Class:
DEG_COP1_1
Location:
341:351
E3 ligase:
COP1
DEGRON score:
0.8483
ASA_SCORE:
64.8636
COIL:
0.8851
CONS_SCORE:
0.4578
DSS_SCORE:
0.5429
HELIX:
0.0641
FCONS_SCORE:
0.9993
RIG_SCORE:
0.6411
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L344S
DO228246
BRCA
ICGC
DTSLGLVPSGA
DEG_COP1_1
0.6556
p.L344S
ACH-000633
Gastric Cancer
CCLE
DTSLGLVPSGA
DEG_COP1_1
0.6556
p.D341Y
DO222884
COCA
ICGC
DTSLGLVPSGA
DEG_COP1_1
0.7325
p.P357L
DO222875
MELA
ICGC
DTSLGLVPSGA
DEG_COP1_1
0.1667
p.P356L
DO229257
THCA
ICGC
DTSLGLVPSGA
DEG_COP1_1
0.1944
p.Q331H
DO229229
THCA
ICGC
DTSLGLVPSGA
DEG_COP1_1
0.0556
p.G358S
ACH-001518
Endometrial/Uterine Cancer
CCLE
DTSLGLVPSGA
DEG_COP1_1
0.1389
Drug responses associated with LHX3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DTSLGLVPSGA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UBR4
LIM/homeobox protein Lhx3
DEG_COP1_1
341:351
DTSLGLVPSGA
COP1
0.8483
More...