DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EEEEEEDEPVPEA
Uniprot ID:
Q96DZ5
Source protein:
CAP-Gly domain-containing linker protein 3
Source gene:
CLIP3
Class:
DEG_COP1_1
Location:
18:30
E3 ligase:
COP1
DEGRON score:
0.8055
ASA_SCORE:
107.9154
COIL:
0.8131
CONS_SCORE:
0.4085
DSS_SCORE:
0.9194
HELIX:
0.1552
FCONS_SCORE:
1.0256
RIG_SCORE:
0.5592
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q35K
TCGA-99-8025
LUAD
TCGA
EEEEEEDEPVPEA
DEG_COP1_1
0.1944
p.Q35K
DO24255
LUAD
ICGC
EEEEEEDEPVPEA
DEG_COP1_1
0.1944
p.E21D
TCGA-F4-6570
COAD
TCGA
EEEEEEDEPVPEA
DEG_COP1_1
0.5647
p.E21D
DO10443
COAD
ICGC
EEEEEEDEPVPEA
DEG_COP1_1
0.5647
p.P12T
TCGA-ZJ-AB0I
CESC
TCGA
EEEEEEDEPVPEA
DEG_COP1_1
0.1667
p.P12T
DO219761
CESC
ICGC
EEEEEEDEPVPEA
DEG_COP1_1
0.1667
p.P11L
DO228941
LICA
ICGC
EEEEEEDEPVPEA
DEG_COP1_1
0.1389
p.P11L
SIDM01007
T-Lymphoblastic Leukemia
GDSC
EEEEEEDEPVPEA
DEG_COP1_1
0.1389
p.P11L
SIDM01781
Gastric Carcinoma
GDSC
EEEEEEDEPVPEA
DEG_COP1_1
0.1389
p.P11Q
DO228978
LICA
ICGC
EEEEEEDEPVPEA
DEG_COP1_1
0.1389
p.E29D
DO38404
STAD
ICGC
EEEEEEDEPVPEA
DEG_COP1_1
0.5647
p.R14G
ACH-000191
Thyroid Cancer
CCLE
EEEEEEDEPVPEA
DEG_COP1_1
0.2222
Drug responses associated with CLIP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EEEEEEDEPVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96DZ5
CAP-Gly domain-containing linker protein 3
DEG_COP1_1
18:30
EEEEEEDEPVPEA
COP1
0.8055
More...