DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
FLLLWALL
Uniprot ID:
P15813
Source protein:
Antigen-presenting glycoprotein CD1d
Source gene:
CD1D
Class:
DEG_MDM2_SWIB_1
Location:
6:13
E3 ligase:
MDM2
DEGRON score:
0.8649
ASA_SCORE:
83.3
COIL:
0.4074
CONS_SCORE:
0.605
DSS_SCORE:
0.0009
HELIX:
0.512
FCONS_SCORE:
1.4654
RIG_SCORE:
1.0478
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A11E
SIDM00568
Gastric Carcinoma
GDSC
FLLLWALL
DEG_MDM2_SWIB_1
0.659
p.A11E
ACH-000247
Gastric Cancer
CCLE
FLLLWALL
DEG_MDM2_SWIB_1
0.659
p.A11V
DO42673
UCEC
ICGC
FLLLWALL
DEG_MDM2_SWIB_1
0.5825
p.Q14R
DO229211
THCA
ICGC
FLLLWALL
DEG_MDM2_SWIB_1
0.3056
p.C3G
DO218908
SKCA
ICGC
FLLLWALL
DEG_MDM2_SWIB_1
0.25
p.A19V
DO222413
MELA
ICGC
FLLLWALL
DEG_MDM2_SWIB_1
0.1667
p.Q23K
DO50894
LICA
ICGC
FLLLWALL
DEG_MDM2_SWIB_1
0.0556
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Drug responses associated with CD1D mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of FLLLWALL
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15813
Antigen-presenting glycoprotein CD1d
DEG_MDM2_SWIB_1
6:13
FLLLWALL
MDM2
0.8649
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