DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FLPFAD
Uniprot ID:
P12956
Source protein:
X-ray repair cross-complementing protein 6
Source gene:
XRCC6
Class:
LIG_APCC_ABBA_1
Location:
436:441
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6682
ASA_SCORE:
31.6
COIL:
0.582
CONS_SCORE:
0.7531
DSS_SCORE:
0.3115
HELIX:
0.0897
FCONS_SCORE:
1.5634
RIG_SCORE:
0.8562
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P430A
TCGA-39-5022
LUSC
TCGA
FLPFAD
LIG_APCC_ABBA_1
0.1667
p.P430A
DO27604
LUSC
ICGC
FLPFAD
LIG_APCC_ABBA_1
0.1667
p.G431C
TCGA-55-A491
LUAD
TCGA
FLPFAD
LIG_APCC_ABBA_1
0.1944
p.G431C
DO25787
LUAD
ICGC
FLPFAD
LIG_APCC_ABBA_1
0.1944
p.P438S
TCGA-AA-3715
COAD
TCGA
FLPFAD
LIG_APCC_ABBA_1
0.6752
p.P438S
DO8018
COAD
ICGC
FLPFAD
LIG_APCC_ABBA_1
0.6752
p.K443E
TCGA-AG-3906
READ
TCGA
FLPFAD
LIG_APCC_ABBA_1
0.7222
p.K443E
DO36491
READ
ICGC
FLPFAD
LIG_APCC_ABBA_1
0.7222
p.T428N
TCGA-B5-A1MX
UCEC
TCGA
FLPFAD
LIG_APCC_ABBA_1
0.5556
p.T428N
DO41999
UCEC
ICGC
FLPFAD
LIG_APCC_ABBA_1
0.5556
p.G431D
SIDM00082
Melanoma
GDSC
FLPFAD
LIG_APCC_ABBA_1
0.1944
p.G431D
SK-MEL-2
skin
COSMIC
FLPFAD
LIG_APCC_ABBA_1
0.1944
p.R429L
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
FLPFAD
LIG_APCC_ABBA_1
0.1389
Drug responses associated with XRCC6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FLPFAD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12956
X-ray repair cross-complementing protein 6
LIG_APCC_ABBA_1
436:441
FLPFAD
APC,CDC20,FZR1
0.6682
More...