DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FNITWDDL
Uniprot ID:
Q9NXZ2
Source protein:
Probable ATP-dependent RNA helicase DDX43
Source gene:
DDX43
Class:
DEG_MDM2_SWIB_1
Location:
221:228
E3 ligase:
MDM2
DEGRON score:
0.572
ASA_SCORE:
61.9
COIL:
0.5801
CONS_SCORE:
0.3883
DSS_SCORE:
0.4195
HELIX:
0.0585
FCONS_SCORE:
0.9587
RIG_SCORE:
0.8391
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P235T
TCGA-50-6594
LUAD
TCGA
FNITWDDL
DEG_MDM2_SWIB_1
0.1389
p.P235T
DO24275
LUAD
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.1389
p.W216C
TCGA-A2-A0CL
BRCA
TCGA
FNITWDDL
DEG_MDM2_SWIB_1
0.1944
p.W216C
DO2155
BRCA
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.1944
p.F221V
TCGA-BS-A0UF
UCEC
TCGA
FNITWDDL
DEG_MDM2_SWIB_1
0.7068
p.F221V
DO41488
UCEC
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.7068
p.G231V
TCGA-DZ-6133
KIRP
TCGA
FNITWDDL
DEG_MDM2_SWIB_1
0.25
p.G231V
DO20762
KIRP
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.25
p.K233E
TCGA-EE-A2MD
SKCM
TCGA
FNITWDDL
DEG_MDM2_SWIB_1
0.3056
p.K233E
DO222434
MELA
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.3056
p.K233E
DO37851
SKCM
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.3056
p.T224S
TCGA-KK-A7B2
PRAD
TCGA
FNITWDDL
DEG_MDM2_SWIB_1
0.6005
p.T224S
DO51367
PRAD
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.6005
p.L228F
DO48384
BLCA
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.6981
p.K218R
DO225129
BRCA
ICGC
FNITWDDL
DEG_MDM2_SWIB_1
0.3611
p.T224A
SIDM01060
Melanoma
GDSC
FNITWDDL
DEG_MDM2_SWIB_1
0.6028
p.T224A
ACH-000882
Skin Cancer
CCLE
FNITWDDL
DEG_MDM2_SWIB_1
0.6028
p.T224A
IGR-1
skin
COSMIC
FNITWDDL
DEG_MDM2_SWIB_1
0.6028
Drug responses associated with DDX43 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FNITWDDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NXZ2
Probable ATP-dependent RNA helicase DDX43
DEG_MDM2_SWIB_1
221:228
FNITWDDL
MDM2
0.572
More...