DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FQPFGD
Uniprot ID:
Q99942
Source protein:
E3 ubiquitin-protein ligase RNF5
Source gene:
RNF5
Class:
LIG_APCC_ABBA_1
Location:
111:116
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9925
ASA_SCORE:
61.75
COIL:
0.8472
CONS_SCORE:
0.3833
DSS_SCORE:
0.5883
HELIX:
0.0613
FCONS_SCORE:
0.9803
RIG_SCORE:
0.6511
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A104T
TCGA-IB-7651
PAAD
TCGA
FQPFGD
LIG_APCC_ABBA_1
0.1389
p.A104T
DO46657
PAAD
ICGC
FQPFGD
LIG_APCC_ABBA_1
0.1389
p.A104T
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
FQPFGD
LIG_APCC_ABBA_1
0.1389
p.A104T
SIDM01728
Endometrial Carcinoma
GDSC
FQPFGD
LIG_APCC_ABBA_1
0.1389
p.A104T
SIDM01763
Rhabdomyosarcoma
GDSC
FQPFGD
LIG_APCC_ABBA_1
0.1389
p.A104T
SIDM01391
Neuroblastoma
GDSC
FQPFGD
LIG_APCC_ABBA_1
0.1389
p.S107G
DO45267
LIRI
ICGC
FQPFGD
LIG_APCC_ABBA_1
0.6667
p.S123A
DO227835
PBCA
ICGC
FQPFGD
LIG_APCC_ABBA_1
0.1389
p.R102I
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
FQPFGD
LIG_APCC_ABBA_1
0.0833
p.R102I
ACH-000789
Lung Cancer
CCLE
FQPFGD
LIG_APCC_ABBA_1
0.0833
p.R102I
NCI-H810
lung
COSMIC
FQPFGD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with RNF5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FQPFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99942
E3 ubiquitin-protein ligase RNF5
LIG_APCC_ABBA_1
111:116
FQPFGD
APC,CDC20,FZR1
0.9925
More...