DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GPRAKVSPV
Uniprot ID:
Q8WUX9
Source protein:
Charged multivesicular body protein 7
Source gene:
CHMP7
Class:
DEG_SIAH_1
Location:
226:234
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9637
ASA_SCORE:
82.6111
COIL:
0.909
CONS_SCORE:
0.5822
DSS_SCORE:
0.2993
HELIX:
0.0298
FCONS_SCORE:
0.8778
RIG_SCORE:
0.7147
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R228H
TCGA-AP-A0LM
UCEC
TCGA
GPRAKVSPV
DEG_SIAH_1
0.7133
p.R228H
DO43306
UCEC
ICGC
GPRAKVSPV
DEG_SIAH_1
0.7133
p.I220N
DO52479
COCA
ICGC
GPRAKVSPV
DEG_SIAH_1
0.1667
p.K222N
DO229037
LICA
ICGC
GPRAKVSPV
DEG_SIAH_1
0.3333
p.K222R
DO45069
LINC
ICGC
GPRAKVSPV
DEG_SIAH_1
0.3333
p.V237I
DO232761
PBCA
ICGC
GPRAKVSPV
DEG_SIAH_1
0.25
p.A229T
SIDM01611
Endometrial Carcinoma
GDSC
GPRAKVSPV
DEG_SIAH_1
0.7139
p.A229T
ACH-000996
Endometrial/Uterine Cancer
CCLE
GPRAKVSPV
DEG_SIAH_1
0.7139
Drug responses associated with CHMP7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GPRAKVSPV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WUX9
Charged multivesicular body protein 7
DEG_SIAH_1
226:234
GPRAKVSPV
SIAH1,SIAH2,SIAH3
0.9637
More...