DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRGNLGLIP
Uniprot ID:
Q9P0L1
Source protein:
Zinc finger protein with KRAB and SCAN domains 7
Source gene:
ZKSCAN7
Class:
DEG_APCC_DBOX_1
Location:
5:13
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9993
ASA_SCORE:
72.1111
COIL:
0.8087
CONS_SCORE:
0.6814
DSS_SCORE:
0.6567
HELIX:
0.0919
FCONS_SCORE:
1.2045
RIG_SCORE:
0.7073
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P13L
SIDM01943
Colorectal Carcinoma
GDSC
GRGNLGLIP
DEG_APCC_DBOX_1
0.6471
p.P13T
SIDM01943
Colorectal Carcinoma
GDSC
GRGNLGLIP
DEG_APCC_DBOX_1
0.5919
p.N8D
TCGA-DI-A1BU
UCEC
TCGA
GRGNLGLIP
DEG_APCC_DBOX_1
0.5821
p.N8D
DO42023
UCEC
ICGC
GRGNLGLIP
DEG_APCC_DBOX_1
0.5821
p.S15N
DO2706
BRCA
ICGC
GRGNLGLIP
DEG_APCC_DBOX_1
0.2778
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Drug responses associated with ZKSCAN7 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of GRGNLGLIP
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P0L1
Zinc finger protein with KRAB and SCAN domains 7
DEG_APCC_DBOX_1
5:13
GRGNLGLIP
APC,CDC20,FZR1
0.9993
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