DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
HRLLLQPVH
Uniprot ID:
O15534
Source protein:
Period circadian protein homolog 1
Source gene:
PER1
Class:
DEG_APCC_DBOX_1
Location:
494:502
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6784
ASA_SCORE:
89.4111
COIL:
0.5213
CONS_SCORE:
0.5828
DSS_SCORE:
0.5319
HELIX:
0.4219
FCONS_SCORE:
1.4114
RIG_SCORE:
0.7394
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I486L
TCGA-A5-A2K5
UCEC
TCGA
HRLLLQPVH
DEG_APCC_DBOX_1
0.1111
p.I493T
TCGA-AR-A0TT
BRCA
TCGA
HRLLLQPVH
DEG_APCC_DBOX_1
0.3056
p.V512D
DO233005
GACA
ICGC
HRLLLQPVH
DEG_APCC_DBOX_1
0.0556
p.G493S
DO38380
STAD
ICGC
HRLLLQPVH
DEG_APCC_DBOX_1
0.3056
p.V501I
SIDM01619
Endometrial Carcinoma
GDSC
HRLLLQPVH
DEG_APCC_DBOX_1
0.5965
p.G497V
HCC202
breast
COSMIC
HRLLLQPVH
DEG_APCC_DBOX_1
0.7532
p.G493V
HCC202
breast
COSMIC
HRLLLQPVH
DEG_APCC_DBOX_1
0.3056
Drug responses associated with PER1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRLLLQPVH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15534
Period circadian protein homolog 1
DEG_APCC_DBOX_1
494:502
HRLLLQPVH
APC,CDC20,FZR1
0.6784
More...