DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPPETPDSKVRM
Uniprot ID:
Q9NZI8
Source protein:
Insulin-like growth factor 2 mRNA-binding protein 1
Source gene:
IGF2BP1
Class:
DEG_ODPH_VHL_1
Location:
441:453
E3 ligase:
VHL
DEGRON score:
0.997
ASA_SCORE:
75.0462
COIL:
0.7958
CONS_SCORE:
0.4526
DSS_SCORE:
0.4393
HELIX:
0.0486
FCONS_SCORE:
0.8593
RIG_SCORE:
0.7224
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R452C
TCGA-06-5416
GBM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
TCGA-19-5956
GBM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
TCGA-AP-A0LM
UCEC
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
TCGA-B5-A0JY
UCEC
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
TCGA-EE-A2MR
SKCM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
TCGA-FR-A7U9
SKCM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
TCGA-WE-A8ZO
SKCM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO13863
GBM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO10880
GBM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO220886
MELA
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO48546
SKCM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO37819
SKCM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO51286
SKCM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO43306
UCEC
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.R452C
DO43041
UCEC
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.719
p.V454F
TCGA-12-1088
GBM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.3056
p.V454F
DO13701
GBM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.3056
p.S449Y
TCGA-17-Z030
LUAD
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.6009
p.R452G
TCGA-38-4629
LUAD
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.6457
p.R452G
DO23771
LUAD
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.6457
p.A442V
TCGA-DU-6408
LGG
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.6936
p.A442V
DO22245
LGG
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.6936
p.K440N
TCGA-Q1-A5R2
CESC
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.75
p.K440N
DO49003
CESC
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.75
p.P460S
TCGA-RP-A695
SKCM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1389
p.P460S
DO51270
SKCM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1389
p.E461K
TCGA-VS-A9UP
CESC
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1111
p.E461K
DO219737
CESC
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1111
p.P459L
TCGA-Z2-AA3S
SKCM
TCGA
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1667
p.P459L
DO51302
SKCM
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1667
p.G458V
DO228896
LICA
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1944
p.G458V
DO229019
LICA
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1944
p.R433L
DO228986
LICA
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1111
p.R433L
SIDM00216
Colorectal Carcinoma
GDSC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1111
p.R433L
ACH-000989
Colon/Colorectal Cancer
CCLE
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1111
p.R433L
SNU-175
large_intestine
COSMIC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1111
p.E445K
DO33344
PACA
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.591
p.E445K
ACH-000455
Brain Cancer
CCLE
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.591
p.R433Q
DO229548
PRAD
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.1111
p.A437T
DO41199
UCEC
ICGC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.2222
p.R452H
SIDM01619
Endometrial Carcinoma
GDSC
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.7133
p.R452H
ACH-000984
Endometrial/Uterine Cancer
CCLE
IAPPETPDSKVRM
DEG_ODPH_VHL_1
0.7133
Drug responses associated with IGF2BP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPPETPDSKVRM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZI8
Insulin-like growth factor 2 mRNA-binding protein 1
DEG_ODPH_VHL_1
441:453
IAPPETPDSKVRM
VHL
0.997
More...