DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IKLYRE
Uniprot ID:
P12956
Source protein:
X-ray repair cross-complementing protein 6
Source gene:
XRCC6
Class:
LIG_APCC_ABBA_1
Location:
286:291
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8922
ASA_SCORE:
81
COIL:
0.5068
CONS_SCORE:
0.4345
DSS_SCORE:
0.4305
HELIX:
0.031
FCONS_SCORE:
0.9754
RIG_SCORE:
0.7982
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K290N
HCC2998
large_intestine
COSMIC
IKLYRE
LIG_APCC_ABBA_1
0.6918
p.K282N
TCGA-AA-A010
COAD
TCGA
IKLYRE
LIG_APCC_ABBA_1
0.6667
p.I286V
COR-L321
NS
COSMIC
IKLYRE
LIG_APCC_ABBA_1
0.5965
p.K287Q
TCGA-E6-A1LX
UCEC
TCGA
IKLYRE
LIG_APCC_ABBA_1
0.5833
p.K287Q
DO41020
UCEC
ICGC
IKLYRE
LIG_APCC_ABBA_1
0.5833
p.P284S
TCGA-GD-A3OQ
BLCA
TCGA
IKLYRE
LIG_APCC_ABBA_1
0.2778
p.P284S
DO506
BLCA
ICGC
IKLYRE
LIG_APCC_ABBA_1
0.2778
p.R284C
HT-115
large_intestine
COSMIC
IKLYRE
LIG_APCC_ABBA_1
0.2778
p.E294D
TCGA-D8-A1XK
BRCA
TCGA
IKLYRE
LIG_APCC_ABBA_1
0.25
p.E294D
DO4749
BRCA
ICGC
IKLYRE
LIG_APCC_ABBA_1
0.25
p.K279R
DO228960
LICA
ICGC
IKLYRE
LIG_APCC_ABBA_1
0.25
p.P295S
DO218857
SKCA
ICGC
IKLYRE
LIG_APCC_ABBA_1
0.2222
p.V296M
TCGA-GF-A6C9
SKCM
TCGA
IKLYRE
LIG_APCC_ABBA_1
0.1944
p.V296M
DO51254
SKCM
ICGC
IKLYRE
LIG_APCC_ABBA_1
0.1944
p.K281N
HCC2998
large_intestine
COSMIC
IKLYRE
LIG_APCC_ABBA_1
0.1944
p.A280S
TCGA-CM-6171
COAD
TCGA
IKLYRE
LIG_APCC_ABBA_1
0.1667
p.A280S
DO8151
COAD
ICGC
IKLYRE
LIG_APCC_ABBA_1
0.1667
p.I277V
COR-L321
NS
COSMIC
IKLYRE
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with XRCC6 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of IKLYRE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12956
X-ray repair cross-complementing protein 6
LIG_APCC_ABBA_1
286:291
IKLYRE
APC,CDC20,FZR1
0.8922
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