DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPIFED
Uniprot ID:
P02751
Source protein:
Fibronectin
Source gene:
FN1
Class:
LIG_APCC_ABBA_1
Location:
1309:1314
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8502
ASA_SCORE:
72.6167
COIL:
0.2633
CONS_SCORE:
0.5164
DSS_SCORE:
0.0703
HELIX:
0.003
FCONS_SCORE:
1.193
RIG_SCORE:
0.9025
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1319L
TCGA-99-8025
LUAD
TCGA
IPIFED
LIG_APCC_ABBA_1
0.1944
p.S1319L
DO24255
LUAD
ICGC
IPIFED
LIG_APCC_ABBA_1
0.1944
p.R1299C
TCGA-AP-A0LM
UCEC
TCGA
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299C
DO43306
UCEC
ICGC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299H
TCGA-B5-A3FA
UCEC
TCGA
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299H
TCGA-CG-4305
STAD
TCGA
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299H
DO38823
STAD
ICGC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299H
DO52402
UCEC
ICGC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299H
SIDM02041
Colorectal Carcinoma
GDSC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.V1316A
TCGA-BR-8361
STAD
TCGA
IPIFED
LIG_APCC_ABBA_1
0.2778
p.V1316A
DO48032
STAD
ICGC
IPIFED
LIG_APCC_ABBA_1
0.2778
p.T1324A
TCGA-G4-6588
COAD
TCGA
IPIFED
LIG_APCC_ABBA_1
0.0556
p.T1324A
DO10140
COAD
ICGC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299S
TCGA-GN-A262
SKCM
TCGA
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299S
DO229019
LICA
ICGC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.R1299S
DO37515
SKCM
ICGC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.L1299M
DO223732
CESC
ICGC
IPIFED
LIG_APCC_ABBA_1
0.0556
p.E1313D
DO224616
COCA
ICGC
IPIFED
LIG_APCC_ABBA_1
0.5647
p.P1318H
DO49694
LIHC
ICGC
IPIFED
LIG_APCC_ABBA_1
0.2222
p.S1317Y
DO43578
UCEC
ICGC
IPIFED
LIG_APCC_ABBA_1
0.25
p.E1313Q
SIDM01160
Bladder Carcinoma
GDSC
IPIFED
LIG_APCC_ABBA_1
0.5633
p.E1313Q
ACH-000384
Bladder Cancer
CCLE
IPIFED
LIG_APCC_ABBA_1
0.5633
p.E1313Q
SW780
urinary_tract
COSMIC
IPIFED
LIG_APCC_ABBA_1
0.5633
Drug responses associated with FN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPIFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P02751
Fibronectin
LIG_APCC_ABBA_1
1309:1314
IPIFED
APC,CDC20,FZR1
0.8502
More...