DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPTPPVT
Uniprot ID:
Q9NZV8
Source protein:
Potassium voltage-gated channel subfamily D member 2
Source gene:
KCND2
Class:
DEG_SCF_FBW7_1
Location:
600:606
E3 ligase:
FBXW7
DEGRON score:
0.9964
ASA_SCORE:
76.9571
COIL:
0.9011
CONS_SCORE:
0.3419
DSS_SCORE:
0.61
HELIX:
0.0081
FCONS_SCORE:
1.0097
RIG_SCORE:
0.7065
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D612N
TCGA-EE-A2GS
SKCM
TCGA
IPTPPVT
DEG_SCF_FBW7_1
0.1667
p.D612N
TCGA-JW-A5VL
CESC
TCGA
IPTPPVT
DEG_SCF_FBW7_1
0.1667
p.D612N
TCGA-V5-AASV
ESCA
TCGA
IPTPPVT
DEG_SCF_FBW7_1
0.1667
p.D612N
DO49976
CESC
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.1667
p.D612N
DO222880
MELA
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.1667
p.D612N
DO37465
SKCM
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.1667
p.P601Q
TCGA-ER-A2NF
SKCM
TCGA
IPTPPVT
DEG_SCF_FBW7_1
0.5924
p.P601Q
DO47451
SKCM
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.5924
p.E615K
TCGA-OD-A75X
SKCM
TCGA
IPTPPVT
DEG_SCF_FBW7_1
0.0833
p.E615K
DO48601
SKCM
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.0833
p.P603L
DO222884
COCA
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.7582
p.T606I
DO50450
ESAD
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.7078
p.D612Y
DO229027
LICA
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.1667
p.P601T
DO220891
MELA
ICGC
IPTPPVT
DEG_SCF_FBW7_1
0.5919
p.Q590P
SIDM01582
Gastric Carcinoma
GDSC
IPTPPVT
DEG_SCF_FBW7_1
0.0556
p.Q590P
ACH-000507
Gastric Cancer
CCLE
IPTPPVT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with KCND2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPTPPVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZV8
Potassium voltage-gated channel subfamily D member 2
DEG_SCF_FBW7_1
600:606
IPTPPVT
FBXW7
0.9964
More...