DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IQLHRE
Uniprot ID:
Q86X52
Source protein:
Chondroitin sulfate synthase 1
Source gene:
CHSY1
Class:
LIG_APCC_ABBA_1
Location:
332:337
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8771
ASA_SCORE:
82.9667
COIL:
0.3455
CONS_SCORE:
0.576
DSS_SCORE:
0.1852
HELIX:
0.6005
FCONS_SCORE:
1.3322
RIG_SCORE:
0.8485
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V339F
TCGA-55-7994
LUAD
TCGA
IQLHRE
LIG_APCC_ABBA_1
0.2778
p.V339F
DO45311
LUAD
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.2778
p.I332T
TCGA-BR-6452
STAD
TCGA
IQLHRE
LIG_APCC_ABBA_1
0.7078
p.I332T
DO38404
STAD
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.7078
p.E326K
TCGA-CM-4746
COAD
TCGA
IQLHRE
LIG_APCC_ABBA_1
0.1667
p.E326K
TCGA-EO-A22X
UCEC
TCGA
IQLHRE
LIG_APCC_ABBA_1
0.1667
p.E326K
DO7882
COAD
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.1667
p.E326K
DO43907
UCEC
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.1667
p.R336S
TCGA-D3-A2J6
SKCM
TCGA
IQLHRE
LIG_APCC_ABBA_1
0.6316
p.R336S
DO37901
SKCM
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.6316
p.R322C
TCGA-EE-A29C
SKCM
TCGA
IQLHRE
LIG_APCC_ABBA_1
0.0556
p.R322C
DO222727
MELA
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.0556
p.R322C
DO38028
SKCM
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.0556
p.R322C
SIDM00429
B-Lymphoblastic Leukemia
GDSC
IQLHRE
LIG_APCC_ABBA_1
0.0556
p.R322C
ACH-000938
Leukemia
CCLE
IQLHRE
LIG_APCC_ABBA_1
0.0556
p.R322C
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
IQLHRE
LIG_APCC_ABBA_1
0.0556
p.R336C
TCGA-K1-A6RT
SARC
TCGA
IQLHRE
LIG_APCC_ABBA_1
0.719
p.R336C
DO220193
SARC
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.719
p.H335N
DO229025
LICA
ICGC
IQLHRE
LIG_APCC_ABBA_1
0.7423
p.E337K
SIDM01611
Endometrial Carcinoma
GDSC
IQLHRE
LIG_APCC_ABBA_1
0.7022
p.E337K
ACH-000996
Endometrial/Uterine Cancer
CCLE
IQLHRE
LIG_APCC_ABBA_1
0.7022
p.R330C
ACH-000597
Rhabdoid
CCLE
IQLHRE
LIG_APCC_ABBA_1
0.2778
p.R330C
ACH-001200
Rhabdoid
CCLE
IQLHRE
LIG_APCC_ABBA_1
0.2778
p.L327I
ACH-000918
Leukemia
CCLE
IQLHRE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with CHSY1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IQLHRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86X52
Chondroitin sulfate synthase 1
LIG_APCC_ABBA_1
332:337
IQLHRE
APC,CDC20,FZR1
0.8771
More...