DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
IQPHDD
Uniprot ID:
P25208
Source protein:
Nuclear transcription factor Y subunit beta
Source gene:
NFYB
Class:
LIG_APCC_ABBA_1
Location:
29:34
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9648
ASA_SCORE:
109.4833
COIL:
0.939
CONS_SCORE:
0.5548
DSS_SCORE:
0.6557
HELIX:
0.0177
FCONS_SCORE:
0.9862
RIG_SCORE:
0.6928
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M39T
TCGA-AZ-6598
COAD
TCGA
IQPHDD
LIG_APCC_ABBA_1
0.1944
p.M39T
DO10276
COAD
ICGC
IQPHDD
LIG_APCC_ABBA_1
0.1944
p.H42R
TCGA-D1-A17Q
UCEC
TCGA
IQPHDD
LIG_APCC_ABBA_1
0.1111
p.H42R
DO41903
UCEC
ICGC
IQPHDD
LIG_APCC_ABBA_1
0.1111
p.I29V
DO50367
ESAD
ICGC
IQPHDD
LIG_APCC_ABBA_1
0.5965
p.S38R
DO229037
LICA
ICGC
IQPHDD
LIG_APCC_ABBA_1
0.2222
p.D37G
DO228138
PBCA
ICGC
IQPHDD
LIG_APCC_ABBA_1
0.25
p.S38N
SIDM00447
B-Lymphoblastic Leukemia
GDSC
IQPHDD
LIG_APCC_ABBA_1
0.2222
p.S38N
ACH-000960
Leukemia
CCLE
IQPHDD
LIG_APCC_ABBA_1
0.2222
p.S38N
REH
haematopoietic_and_lymphoid_tissue
COSMIC
IQPHDD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with NFYB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IQPHDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25208
Nuclear transcription factor Y subunit beta
LIG_APCC_ABBA_1
29:34
IQPHDD
APC,CDC20,FZR1
0.9648
More...