DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITLFND
Uniprot ID:
Q3B7T1
Source protein:
Erythroid differentiation-related factor 1
Source gene:
EDRF1
Class:
LIG_APCC_ABBA_1
Location:
288:293
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8136
ASA_SCORE:
79.3
COIL:
0.6813
CONS_SCORE:
0.3087
DSS_SCORE:
0.4146
HELIX:
0.2158
FCONS_SCORE:
0.9044
RIG_SCORE:
0.8092
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D303Y
TCGA-19-5956
GBM
TCGA
ITLFND
LIG_APCC_ABBA_1
0.0556
p.N302H
TCGA-BS-A0UF
UCEC
TCGA
ITLFND
LIG_APCC_ABBA_1
0.0833
p.K301N
TCGA-D1-A17Q
UCEC
TCGA
ITLFND
LIG_APCC_ABBA_1
0.5556
p.G294R
TCGA-FI-A2D0
UCEC
TCGA
ITLFND
LIG_APCC_ABBA_1
0.3056
p.I288V
TCGA-VQ-A91X
STAD
TCGA
ITLFND
LIG_APCC_ABBA_1
0.5965
p.N292S
SIDM00267
Biliary Tract Carcinoma
GDSC
ITLFND
LIG_APCC_ABBA_1
0.5958
p.N292S
TGBC24TKB
biliary_tract
COSMIC
ITLFND
LIG_APCC_ABBA_1
0.5958
p.S297G
SIDM00210
Ovarian Carcinoma
GDSC
ITLFND
LIG_APCC_ABBA_1
0.2222
p.P290A
HCC1395
breast
COSMIC
ITLFND
LIG_APCC_ABBA_1
0.7503
Drug responses associated with EDRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITLFND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q3B7T1
Erythroid differentiation-related factor 1
LIG_APCC_ABBA_1
288:293
ITLFND
APC,CDC20,FZR1
0.8136
More...