DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
KKVIFSE
Uniprot ID:
Q6TGC4
Source protein:
Protein-arginine deiminase type-6
Source gene:
PADI6
Class:
LIG_APCC_ABBAyCdc20_2
Location:
178:184
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7025
ASA_SCORE:
82.0857
COIL:
0.5947
CONS_SCORE:
0.4872
DSS_SCORE:
0.2432
HELIX:
0.34
FCONS_SCORE:
1.2478
RIG_SCORE:
0.8659
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T187M
SIDM00704
Small Cell Lung Carcinoma
GDSC
KKVIFSE
LIG_APCC_ABBAyCdc20_2
0.25
p.T177A
SIDM00534
Colorectal Carcinoma
GDSC
KKVIFSE
LIG_APCC_ABBAyCdc20_2
0.3056
p.I181F
SIDM01780
B-Cell Non-Hodgkin's Lymphoma
GDSC
KKVIFSE
LIG_APCC_ABBAyCdc20_2
0.7415
Drug responses associated with PADI6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKVIFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6TGC4
Protein-arginine deiminase type-6
LIG_APCC_ABBAyCdc20_2
178:184
KKVIFSE
APC,CDC20,FZR1
0.7025
More...