DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KQVVFRD
Uniprot ID:
Q86YI8
Source protein:
PHD finger protein 13
Source gene:
PHF13
Class:
LIG_APCC_ABBAyCdc20_2
Location:
205:211
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9133
ASA_SCORE:
106.3571
COIL:
0.728
CONS_SCORE:
0.3574
DSS_SCORE:
0.4947
HELIX:
0.0813
FCONS_SCORE:
0.9854
RIG_SCORE:
0.8077
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R210L
TCGA-37-5819
LUSC
TCGA
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.7316
p.R210L
DO26479
LUSC
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.7316
p.Q203H
TCGA-44-6774
LUAD
TCGA
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.2778
p.Q203H
DO25000
LUAD
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R198W
TCGA-AX-A1C4
UCEC
TCGA
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R198W
DO222765
COCA
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R198W
DO42480
UCEC
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R210Q
TCGA-BR-4184
STAD
TCGA
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.6218
p.R210Q
TCGA-G5-6233
READ
TCGA
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.6218
p.R210Q
DO36626
READ
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.6218
p.R210Q
DO38328
STAD
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.6218
p.V201I
TCGA-DU-6392
LGG
TCGA
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.2222
p.V201I
DO222503
COCA
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.2222
p.V201I
DO22237
LGG
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.2222
p.E212D
TCGA-ER-A19P
SKCM
TCGA
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.3056
p.E212D
DO47623
SKCM
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.3056
p.S214N
DO228138
PBCA
ICGC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.25
p.R202Q
SIDM00448
B-Cell Non-Hodgkin's Lymphoma
GDSC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.25
p.R202Q
ACH-001638
Lymphoma
CCLE
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.25
p.R202Q
RC-K8
haematopoietic_and_lymphoid_tissue
COSMIC
KQVVFRD
LIG_APCC_ABBAyCdc20_2
0.25
Drug responses associated with PHF13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KQVVFRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YI8
PHD finger protein 13
LIG_APCC_ABBAyCdc20_2
205:211
KQVVFRD
APC,CDC20,FZR1
0.9133
More...