DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KVRVHPE
Uniprot ID:
A6NM62
Source protein:
Leucine-rich repeat-containing protein 53
Source gene:
LRRC53
Class:
LIG_APCC_ABBAyCdc20_2
Location:
726:732
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5155
ASA_SCORE:
83.4857
COIL:
0.616
CONS_SCORE:
0.325
DSS_SCORE:
0.4913
HELIX:
0.106
FCONS_SCORE:
1
RIG_SCORE:
0.7286
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C742R
DO230659
LAML
ICGC
KVRVHPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.S734F
DO222880
MELA
ICGC
KVRVHPE
LIG_APCC_ABBAyCdc20_2
0.2778
p.S734F
DO229446
SKCA
ICGC
KVRVHPE
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with LRRC53 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KVRVHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NM62
Leucine-rich repeat-containing protein 53
LIG_APCC_ABBAyCdc20_2
726:732
KVRVHPE
APC,CDC20,FZR1
0.5155
More...