DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPAAGDTIISLDF
Uniprot ID:
Q16665
Source protein:
Hypoxia-inducible factor 1-alpha
Source gene:
HIF1A
Class:
DEG_ODPH_VHL_1
Location:
400:413
E3 ligase:
VHL
DEGRON score:
0.9709
ASA_SCORE:
74.3571
COIL:
0.8164
CONS_SCORE:
0.7571
DSS_SCORE:
0.3503
HELIX:
0.0586
FCONS_SCORE:
1.0422
RIG_SCORE:
0.7727
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D412N
TCGA-AP-A059
UCEC
TCGA
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.5821
p.S409I
TCGA-B5-A3FA
UCEC
TCGA
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.7341
p.S409I
DO52402
UCEC
ICGC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.7341
p.E403K
TCGA-D5-6928
COAD
TCGA
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.7022
p.E403K
DO7776
COAD
ICGC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.7022
p.K415R
TCGA-KS-A4IB
THCA
TCGA
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.2778
p.K415R
DO40033
THCA
ICGC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.2778
p.A397S
DO51189
LUAD
ICGC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.25
p.P423Q
DO42280
UCEC
ICGC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.0556
p.R404Q
DO42472
UCEC
ICGC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.7329
p.R404Q
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.7329
p.M393T
SIDM00870
Breast Carcinoma
GDSC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.1389
p.M393T
HCC202
breast
COSMIC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.1389
p.S406T
RL
haematopoietic_and_lymphoid_tissue
COSMIC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.7116
p.E420Q
PCI-4B
upper_aerodigestive_tract
COSMIC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.1389
p.A410V
SNU-1040
large_intestine
COSMIC
LAPAAGDTIISLDF
DEG_ODPH_VHL_1
0.6936
Drug responses associated with HIF1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPAAGDTIISLDF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16665
Hypoxia-inducible factor 1-alpha
DEG_ODPH_VHL_1
400:413
LAPAAGDTIISLDF
VHL
0.9709
More...