DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPLNLKKEGLRV
Uniprot ID:
Q16670
Source protein:
Zinc finger and SCAN domain-containing protein 26
Source gene:
ZSCAN26
Class:
DEG_ODPH_VHL_1
Location:
11:23
E3 ligase:
VHL
DEGRON score:
0.8934
ASA_SCORE:
88.6462
COIL:
0.7041
CONS_SCORE:
0.5065
DSS_SCORE:
0.2313
HELIX:
0.1226
FCONS_SCORE:
1.4209
RIG_SCORE:
0.7746
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N15S
SIDM01117
Small Cell Lung Carcinoma
GDSC
LAPLNLKKEGLRV
DEG_ODPH_VHL_1
0.5958
p.N15S
SIDM00544
Neuroblastoma
GDSC
LAPLNLKKEGLRV
DEG_ODPH_VHL_1
0.5958
p.N15S
SIDM00493
Other Solid Cancers
GDSC
LAPLNLKKEGLRV
DEG_ODPH_VHL_1
0.5958
p.N15S
SIDM00397
Acute Myeloid Leukemia
GDSC
LAPLNLKKEGLRV
DEG_ODPH_VHL_1
0.5958
p.N15S
SIDM01033
Bladder Carcinoma
GDSC
LAPLNLKKEGLRV
DEG_ODPH_VHL_1
0.5958
p.N15S
SIDM00303
Ovarian Carcinoma
GDSC
LAPLNLKKEGLRV
DEG_ODPH_VHL_1
0.5958
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Drug responses associated with ZSCAN26 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LAPLNLKKEGLRV
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16670
Zinc finger and SCAN domain-containing protein 26
DEG_ODPH_VHL_1
11:23
LAPLNLKKEGLRV
VHL
0.8934
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