DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPSFVEFDMSV
Uniprot ID:
Q6ZS81
Source protein:
WD repeat- and FYVE domain-containing protein 4
Source gene:
WDFY4
Class:
DEG_ODPH_VHL_1
Location:
1018:1029
E3 ligase:
VHL
DEGRON score:
0.6671
ASA_SCORE:
48.975
COIL:
0.5477
CONS_SCORE:
0.4322
DSS_SCORE:
0.1428
HELIX:
0.0626
FCONS_SCORE:
1.4376
RIG_SCORE:
0.8236
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y1032H
TCGA-2W-A8YY
CESC
TCGA
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.25
p.Y1032H
DO223732
CESC
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.25
p.P1038Q
TCGA-AA-3984
COAD
TCGA
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.0833
p.P1038Q
DO9002
COAD
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.0833
p.S1021L
TCGA-B6-A0RU
BRCA
TCGA
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6556
p.S1021L
TCGA-D5-6927
COAD
TCGA
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6556
p.S1021L
DO1954
BRCA
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6556
p.S1021L
DO10332
COAD
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6556
p.P1013S
TCGA-DI-A1BU
UCEC
TCGA
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.1944
p.P1013S
DO42023
UCEC
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.1944
p.F1025S
TCGA-F5-6814
READ
TCGA
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6871
p.F1025S
DO36556
READ
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6871
p.V1029M
DO223531
CLLE
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6097
p.A1017D
DO34272
PACA
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.3056
p.R1009C
DO32964
PACA
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.0833
p.D1028N
DO42312
UCEC
ICGC
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.6932
p.P1008S
ACH-000872
Lung Cancer
CCLE
LAPSFVEFDMSV
DEG_ODPH_VHL_1
0.0556
Drug responses associated with WDFY4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPSFVEFDMSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZS81
WD repeat- and FYVE domain-containing protein 4
DEG_ODPH_VHL_1
1018:1029
LAPSFVEFDMSV
VHL
0.6671
More...