DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPSVDFQQSVTV
Uniprot ID:
Q9NZJ0
Source protein:
Denticleless protein homolog
Source gene:
DTL
Class:
DEG_ODPH_VHL_1
Location:
209:221
E3 ligase:
VHL
DEGRON score:
0.6196
ASA_SCORE:
53.5538
COIL:
0.6091
CONS_SCORE:
0.5039
DSS_SCORE:
0.3309
HELIX:
0.0321
FCONS_SCORE:
1.0473
RIG_SCORE:
0.7822
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G208V
TCGA-B8-A54J
KIRC
TCGA
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.3056
p.L223I
TCGA-D3-A3C8
SKCM
TCGA
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.2778
p.K202E
TCGA-VQ-A8P2
STAD
TCGA
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.25
p.S219F
DO1128
BRCA
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.7982
p.R228Q
DO6048
BRCA
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.1389
p.R211Q
DO50449
ESAD
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.7329
p.S225N
DO228827
LICA
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.2222
p.A209S
DO228976
LICA
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.7588
p.R204L
DO229029
LICA
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.1944
p.P223S
DO51268
SKCM
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.2778
p.A216S
DO42472
UCEC
ICGC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.7588
p.K201N
SIDM00837
Colorectal Carcinoma
GDSC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.2222
p.K201N
ACH-000958
Colon/Colorectal Cancer
CCLE
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.2222
p.D226Y
ACH-000998
Colon/Colorectal Cancer
CCLE
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.1944
p.D226Y
CW-2
large_intestine
COSMIC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.1944
p.S217F
Mewo
skin
COSMIC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.7982
p.L230F
CP66-MEL
skin
COSMIC
LAPSVDFQQSVTV
DEG_ODPH_VHL_1
0.0833
Drug responses associated with DTL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPSVDFQQSVTV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZJ0
Denticleless protein homolog
DEG_ODPH_VHL_1
209:221
LAPSVDFQQSVTV
VHL
0.6196
More...