DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPYIPMDDDFQL
Uniprot ID:
Q16665
Source protein:
Hypoxia-inducible factor 1-alpha
Source gene:
HIF1A
Class:
DEG_ODPH_VHL_1
Location:
562:574
E3 ligase:
VHL
DEGRON score:
0.9994
ASA_SCORE:
80.7462
COIL:
0.7812
CONS_SCORE:
0.7866
DSS_SCORE:
0.4296
HELIX:
0.1508
FCONS_SCORE:
1.0492
RIG_SCORE:
0.8118
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K571N
TCGA-AN-A046
BRCA
TCGA
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.6918
p.K571N
TCGA-BS-A0UV
UCEC
TCGA
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.6918
p.K571N
SIDM01611
Endometrial Carcinoma
GDSC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.6918
p.E584D
TCGA-AN-A046
BRCA
TCGA
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.0556
p.A553S
DO228952
LICA
ICGC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.0833
p.I576F
DO22857
LIHC
ICGC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.7222
p.Q577H
DO46483
OV
ICGC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.25
p.L563R
SIDM01043
Other Sarcomas
GDSC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.8428
p.L563R
ESS-1
endometrium
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.8428
p.V560A
SIDM00537
Colorectal Carcinoma
GDSC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.2778
p.V560A
GP5d
large_intestine
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.2778
p.A581P
NCI-H650
lung
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.1389
p.R572P
KMH-2
thyroid
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.7512
p.R572H
SNU-283
large_intestine
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.8244
p.R572H
NCI-H187
lung
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.8244
p.R572C
KMH-2
thyroid
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.8301
p.M573I
SNU-1040
large_intestine
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.7618
p.D563E
NB17
autonomic_ganglia
COSMIC
LAPYIPMDDDFQL
DEG_ODPH_VHL_1
0.6758
Drug responses associated with HIF1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPYIPMDDDFQL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16665
Hypoxia-inducible factor 1-alpha
DEG_ODPH_VHL_1
562:574
LAPYIPMDDDFQL
VHL
0.9994
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